Vibrio cholerae O1 El Tor FJ147: IR04_08960
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Entry
IR04_08960 CDS
T03827
Name
(GenBank) protein disaggregation chaperone
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vcf03110
]
IR04_08960
Chaperones and folding catalysts [BR:
vcf03110
]
Heat shock proteins
HSP100
IR04_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
TniB
nSTAND3
AAA_14
AAA_24
bpMoxR
IstB_IS21
AAA_18
NBD_SMAX1
AAA_7
NACHT
DUF815
AAA_19
DNA_pol3_delta2
RHH_3
CLP1_P
DUF7401
Motif
Other DBs
NCBI-ProteinID:
AJZ99272
LinkDB
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Position
I:843110..845683
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AA seq
857 aa
AA seq
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MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL
RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG
PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL
DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH
HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII
QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE
QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL
SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA
RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP
GSPILLSVKDGNIFASQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgacagatttacgagcaaatttcagatcgcgatttccgatgcccagtcatta
gcgctcggccgtgatcatcaatatatcgaacctgtgcacctgatggtggctctgctggat
caaaacggcagcccgatccgcccattactcaccatgcttaatgtggatgtgatgcaactg
cgctccaaacttggcgaaatgctcgatcgtttacccaaagtcagtggtattggtggtgat
gtacagctctcttcggcgcttggctcgctgtttaatctgtgtgataaggttgcgcaaaag
cgtcaagatgcctacatctcctctgaaatctatctacttgctgcgattgaggacaaaggg
ccactgggtcacttactcaaagagtttggactgaccgagaaaaaagtctctgaagcaata
gagaagattcgtggtggacaaaaggttaatgacccgaatgcggaagagctgcgtcaagcg
ttggaaaaattcaccatcgatctgactgaacgcgctgagcagggcaaactcgatcctgtg
atcggtcgtgatgatgaaattcgccgcaccattcaagtgctgcaacgccgtaccaagaac
aatccggtgatcatcggtgaacccggtgtgggtaaaactgcgattgtggaaggcttggcg
cagcgcatcattaataatgaagtaccagaaggcctgcgtggacggcgagtgttgtcttta
gatatgggcgcgctagtggcaggggcgaaataccgcggcgaatttgaagagcgcttgaaa
tcagtactcaatgagctagcgaaagaagaaggcaatatcatcctcttcattgatgagctg
cacaccatggttggtgcggggaaaggcgaaggctcgatggatgccggcaacatgctcaaa
cccgctttggcgcgtggagaattgcactgtgtcggcgcaaccactttagatgagtaccgc
caatacatcgaaaaagatccagcgttagagcgccgcttccaaaaagtgttggtggatgag
cccacggtggaagataccatcgccatcttgcgtggattgaaagagcgttatgaactgcat
caccatgtcgaaatcacagatccagcgattgtggcggcagcgagcctatcgcatcgctat
atttccgatcgccagttgcctgataaagcgatcgatttgatcgatgaagcggcttcaagc
atccggatgcagattgactccaaaccagaagctctggataagcttgagcgcaaaatcatc
caactgaaaatcgagcagcaagcgctctctaatgagcacgatgaagccagtgaaaaacgc
ttggcgatcttaaatgaagagctgcaagagaaagagcgtgattacgcggagttggaagaa
gtgtggaaagctgaaaaggcggcactctccggcacgcaacatattaaagcggcacttgaa
caagcgcggatggatctggaagtcgctcgccgtgcgggggatttgaaccgcatgtcagag
ctgcaatatggtcgcattccagagctagaaaagcagcttgatctggctgcgcaagccgaa
atgcaggaaatgactctgctacgtaataaagtgacggatgcagaaattgccgaagtgctt
tcaaaacagactggcattccagtatcaaaaatgctcgaagctgagaaagaaaagttgctg
cgcatggaagacgtgctgcataaacgcgtgattggtcaaaaagaagcggtggaagtggtc
gcgaatgcgatccgccgcagtcgcgcagggctttctgatccaaatcgtccgattggctcc
ttcttattcttggggccaacaggggtcggtaaaaccgagctgtgtaaaaccttggctaac
ttcctgtttgacagtgaagatgccatggtacgtgtggatatgtcggaatttatggagaaa
cactcggttgctcgtttagtcggtgcgcctccaggttatgtcggctatgaagaaggtggc
tacttaacggaagctgtacgccgtaaaccttactcggtgattttgctcgatgaagtggaa
aaggcgcacccagatgtcttcaatattctgctgcaagtcttggatgatggccgcttgacg
gacggacaagggcgcacggtcgattttcgaaataccgttgtgatcatgacctccaacttg
ggttcaagccgtatccaagaaaattttgcaaggttggattatcaaggtatcaaagaacaa
gtgatggacgtagtcagcaaacacttccgtcctgagttcttgaaccgagtggatgaaagt
gtggtattccacccattaggacaagagcatatcaagtcgatcgcttctattcagttggcc
cgcctacgtcaacgtttggcagagcgagattaccaactagaggttgatgatgaggcgctg
gatctgattgctcatgtcggcttcgatccggtttatggtgctcgtccactgaaacgcgcg
attcaacaaaatgtggaaaacccactggccaaatcgattctggctggtaagttcctgcct
ggttcacctattttactatcggtaaaagacgggaatattttcgcaagccagtag
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