Vibrio cholerae O1 El Tor FJ147: IR04_09515
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Entry
IR04_09515 CDS
T03827
Name
(GenBank) toxin coregulated pilin
KO
K10930
toxin coregulated pilin
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf05111
Biofilm formation - Vibrio cholerae
Module
vcf_M00852
Vibrio cholerae pathogenicity signature, toxin coregulated pilus
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IR04_09515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vcf02044
]
IR04_09515
Secretion system [BR:
vcf02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
IR04_09515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcpA
N_methyl
PilS
DUF1329
Motif
Other DBs
NCBI-ProteinID:
AJZ99376
LinkDB
All DBs
Position
I:973887..974561
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AA seq
224 aa
AA seq
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MQLLKQLFKKKFVKEEHDKKTGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTK
AAQNLNSVQIAMTQTYRSLGNYPATANASAATQLANGLVSLGKVSADEAKNPFTGTAMGI
FSFPRNSAANKAFAITVGGLTQAQCKTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVA
DAATGAGVIKSIAPGSANLNLTNITHVEKLCTGTAPFTVAFGNS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcaattattaaaacagctttttaagaagaagtttgtaaaagaagaacacgataagaaa
accggtcaagagggtatgacattactcgaagtaatcattgttctgggtattatgggtgtg
gtctcagcgggtgttgttacgctggctcagcgtgcgattgattcgcagaatatgactaag
gctgcgcaaaatctaaacagcgtgcaaattgcaatgacacaaacttatcgtagtcttggt
aattatccagctaccgcaaacgcaagtgctgctacacagctagctaatggtttggtcagc
cttggtaaggtttcagctgatgaggcaaagaatcctttcactggtacagctatggggatt
ttctcatttccacgaaactctgcagcgaataaagcattcgcaattacagtcggtggcttg
acccaagcacaatgtaagactttggttacaagcgtaggggatatgtttccatttatcaac
gtgaaagaaggtgctttcgctgctgtcgctgatcttggtgatttcgaaacgagtgtcgca
gatgctgctactggcgctggcgtaattaagtccattgcaccaggaagtgccaacttaaac
ctaactaatatcacgcatgttgagaagctttgtacaggaactgctccattcacagtagct
tttggtaacagttaa
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