Vibrio cholerae O1 El Tor FJ147: IR04_09565
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Entry
IR04_09565 CDS
T03827
Name
(GenBank) AraC family transcriptional regulator
KO
K10923
AraC family transcriptional regulator, TCP pilus virulence regulatory protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IR04_09565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcf03000
]
IR04_09565
Transcription factors [BR:
vcf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IR04_09565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ToxT_N
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
AJZ99386
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All DBs
Position
I:983334..984164
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AA seq
276 aa
AA seq
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MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL
LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE
HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgattgggaaaaaatcttttcaaactaatgtatatagaatgagtaaatttgatacttac
atattcaataacttatatataaacgactacaaaatgttctggatagatagtggaattgca
aagcttatagataaaaattgcttggttagttatgagataaattcaagttcaattatctta
ctcaagaaaaactctattcagcgattttctttgacttcattatcagatgaaaatataaat
gtttctgtaattacaataagtgattcatttatacgttcactaaaatcttacattcttggt
gatctcatgataaggaatttatatagtgaaaataaagatctattactttggaattgtgaa
cataatgatatagctgtcctttctgaagtggtaaatggtttcagagaaattaattattca
gatgagttcctaaaagtttttttttcagggttcttctcgaaagtagaaaaaaaatataac
tctatatttattactgatgatcttgatgctatggagaaaatttcatgtttagtaaaaagt
gatattacgcgtaattggcgttgggcagatatttgtggtgaattaagaacgaatcggatg
attttgaaaaaagaactagagtctcgaggagtaaagtttagagaattaattaatagcatt
cgaatatcatattcaatttcactaatgaaaaccggtgaattcaaaataaaacagattgca
tatcagtctgggtttgctagcgtttcatatttttctacagtatttaagtcaaccatgaat
gtagcaccaagtgaatatttatttatgttgacaggagttgcagaaaaataa
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