Vibrio cholerae O1 El Tor FJ147: IR04_09640
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Entry
IR04_09640 CDS
T03827
Name
(GenBank) recombination and repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_09640
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IR04_09640
TLS (translesion DNA synthesis) factors
Other SOS response factors
IR04_09640
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
AAA_22
AAA_15
RsgA_GTPase
NTPase_P4
Motif
Other DBs
NCBI-ProteinID:
AJZ99401
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Position
I:complement(1000171..1001835)
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AA seq
554 aa
AA seq
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MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED
KTEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTL
GQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLRENS
QQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEV
NALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAY
VEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQTFVAA
ADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSPLGFDAVTFLVSTNP
GQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRKL
GESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLGGSQIT
ESTLANAKELLIAA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctggctcacttaagtatcaataacttcgctatcgtaaagtcactacaactcgaatta
tcaaaaggaatgaccaccatcaccggtgaaactggtgctggtaaatccattgcgattgat
gctttaggtttatgtctcggtggtcgagccgaagccagcatggtgcgtcaaggtgaagat
aaaaccgaagtcagcgccgcctttcatctggataacaatctgctcgctagccgttggtta
gaagataatgaactgcttgaaggcaaagagtgcattctgcgccgaatcatcaccaaagat
gggcgctctaaagcctttattaatggcagcccagttccgctctctcaactcaaaacattg
gggcaactgctgatcaatgtgcatggtcaacacgcacatcagcaactgatgaaaccggaa
tatcagctcagcatgcttgatcaatacgcaggtcatgcagacttgctcaaagccacgcgt
cacgcctatcaaaattggcgtcaagcgagcaatcagctcaaacagctgcgcgaaaatagc
caacaaaatcaggcacaattacaacttttggaataccaaatcaaagagctcaacgaattg
gctctcggtgaggatgagtttgtcgagctagaacaagagcaaaaacgcttagccaatagc
ggcgatctggcactcaactgccaacgcgcgattgaactgctcaatgaaggggaagaagta
aacgccttaggccttttacaaagtgttagccatacgctgattgatctggctgaaatggat
agcaaactgacagcgctcccttcaatggtggccgaagcgctgatccaacttgaagagact
taccatgaactgcgcaattacttggattcgattgatgtcgacccagaacgcatggcgtat
gtagaagagcgctactccaaagtcatgtcgctcgcgcgtaaacatcatgtactgccagaa
gagctgtatcagcatcaccaagcactcttacagcaaattgctcagctagattgttctgat
gagaaaatgtcagcactcgcgagtgaagtcgacgtgctctaccaaacgtttgttgcggcc
gctgacaaactgcacaaatctcgtgttcgctatgccaaagaattggataaattgattagc
caaagcatgcatgagctgagcatggaaaaagcgcaattcaaaatcgaagtgcagcaagac
agcgcgcactcatcgccattaggttttgatgccgtgactttcttagtctcgacgaacccg
ggtcaaccgctgcaacccatcgccaaagtggcctctggtggtgaactgtcacggatgtca
ttggcgatccaagtgattactgcgcagaaagtcgatactccaagcctgatttttgatgaa
gttgacgtgggtatttcagggccaacagcagccgtagttggcaaactactgcgcaaattg
ggcgagtcgactcaagtactgtgtgtcacccacttaccgcaagtggcaggttgcggacac
catcaactgtttgtcgccaaacagaccaaagcaggcaaaaccgaaacgcaaatgctcaaa
ctggatcaagaacagcgcattgctgaacttgcacgcttgctcggaggcagccaaattacc
gaatccacgctcgcgaatgctaaagagctattaatcgcagcctaa
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