Vibrio cholerae O1 El Tor FJ147: IR04_10800
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Entry
IR04_10800 CDS
T03827
Symbol
oppD
Name
(GenBank) oligopeptide transporter ATP-binding component
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf01501
beta-Lactam resistance
vcf02010
ABC transporters
vcf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IR04_10800 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IR04_10800 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IR04_10800 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_10800 (oppD)
Transporters [BR:
vcf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
IR04_10800 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
DO-GTPase2
nSTAND1
DEAD
DUF87
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AJZ99615
LinkDB
All DBs
Position
I:1245590..1246561
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AA seq
323 aa
AA seq
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MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN
GKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKG
MGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT
TALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDI
FYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREA
PILLPFGNSRQRACFSDWEAWTK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattagatgtcaaagatctgcgcgtagaattctctacccaagacggtattgtc
accgcagtgaacgatctcaatttctctcttaagcagggagaaactttaggtattgtgggc
gaatccggctcaggaaaatcacaaaccgtatttgccatcatggggctactcgccaaaaac
ggcaaaatcaccggtagcgcgaaatttgagggtaaagaaatcctcaacttgccagagcgt
gaactgaataaagtgcgcgccgagcaaatcgcgatgatttttcaagacccaatgacttca
cttaatccctacatgaaagtgagcgatcagctgatggaagtgctgatgctgcataaaggt
atgggtaaagcggaggcgtttgaagagtcagtacgcatgctggaagcggtaaagatccca
gaagcgcgtaagcgtatcaccatgtatccgcacgagttttctggcggtatgcgtcaacgt
gtgatgattgcgatggctttgctgtgtcgcccgaaactgctgattgccgatgaaccgacc
accgcactcgacgttactgttcaagcgcaaatcatggagctgcttaacgaactgaaacgt
gagttcaataccgcaatcatcatgatcacccacgatctgggggtggtggctggctcttgc
gataaagtgctggtgatgtatgccggccgtactatggagtacggttcagtaaacgatatt
ttctacaacccaagccacccttacgcagaaggtttgctgagcgcgatcccgcgcttggat
accgaaggggaagtgttgccgacgattccgggcaacccacctaacttgctgcgtttgcct
gtcggctgtccttatcaagaacgctgccatcgcgtgacggatcgctgtaagcgagaagct
ccgatcttgctgccgtttggtaacagtcgtcaacgtgcgtgtttttctgattgggaggct
tggacaaaatga
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integrated database retrieval system
