Vibrio cholerae O1 El Tor FJ147: IR04_10855
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Entry
IR04_10855 CDS
T03827
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcf03016
]
IR04_10855
Transfer RNA biogenesis [BR:
vcf03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
IR04_10855
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Gene cluster
GFIT
Motif
Pfam:
Dus
Motif
Other DBs
NCBI-ProteinID:
AJZ99626
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Position
I:complement(1258481..1259452)
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AA seq
323 aa
AA seq
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MRVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTP
SGVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIY
QVVKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASE
IKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHN
HAAMPWHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELRTLTQV
EPIVDQLHRYRDQLHHAAAELPV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttattttaggcccgatggagggcgtgttagatcatttgatgcgtgacatgctg
acacaaatcaatgactacgatttctgcgtcaccgaatttgtacgcgtagtgaatctgctg
ctgcctgatcatgtgttttatcgcctctgtcctgaattgcaacagggttctaaaactccg
tccggtgttccggtaaaagtacaactgcttggccaagacccacactggatggccgaaaac
gcgatccgcgctgctgagcttggggcttatggcatcgatctaaatttcggctgccctgcc
aaaatggtcaatcagagcaaaggtggcgcggctcttttgcagcatcccgagttgatttat
caggtggtcaaagcgtgtcgtgacgcagtaccggcgcacattcctgtttcggcgaaaatc
cgcttaggttgggaagatccggaagattgttttgagattgtcgatgccgttgcgcaagct
aaagccgatgagctcactgtgcacgcgcgcaccaaagccggaggctacaaggccagcgaa
atcaaatggcattacattgaccagatccgccaaaaatgcagtattccattgattgctaac
ggtgaagtgtggaattacgccgatggtcaagcttgcatccaaaccacaggtgtcgattca
ctcatggtgtgccgcggcgcgctcaacgtgccgaatttaggcaatgtggtcaaacacaat
cacgccgccatgccttggcatgaagtggtggatttgttgctgcgctacacgcaatttgaa
gtccgtggtgacaaaggcaaatactacccaaaccgtattaagcagtggtttgcttatctg
cgccacgcctaccctcaggctaatgagctgtttggtgagttacgtacgttgactcaagtc
gagccgatcgttgatcagttacatcgctatcgcgatcaactccatcatgctgcggccgag
ctacctgtctaa
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