Vibrio cholerae O1 El Tor FJ147: IR04_10870
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Entry
IR04_10870 CDS
T03827
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
IR04_10870
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
Mg_chelatase
AAA_14
AAA_16
AAA_30
nSTAND3
AAA_22
AAA_19
Sigma54_activat
ResIII
AAA_3
AAA_2
DUF815
AAA_24
AAA_11
Sigma54_activ_2
AAA_18
DNA_pol3_delta2
AAA_25
ATPase_2
NPHP3_N
AAA_33
AAA_28
ABC_tran
IstB_IS21
NTPase_1
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AJZ99629
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Position
I:1260955..1262304
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AA seq
449 aa
AA seq
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MSNYSLDFSGDEDFRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPP
GTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKARENKLSGRRTILFVDEVHRFN
KSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIA
DTERGLGKVAAVFADNVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAE
VAGEKVSRFDNKGDIWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIA
SEDVGNADPRGMQVALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSD
AHNLPEFEVPPHLRNAPTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPT
PRGLETKIAEKLAYLADLNAKSPQKRYEK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaattacagcttagatttttccggcgacgaagattttcgtccgttagctgctcgt
atgcgtccacaaacggtggagcagtatataggtcagcaacacatcttagggccgggaaaa
ccgctgcgccgtgcattagaagcggggcatattcactcgatgattctttggggacctccg
ggcaccggaaaaaccactttagccgaagtggcagccaactacgccaatgcggaagtggaa
cgcgtatcggcggtgacgtccggagtcaaagagatccgtgccgcgatcgaaaaagcgcgt
gagaacaaactcagtggtcgacgcactattctgtttgtcgacgaagtccatcgctttaat
aaatcgcagcaagatgcgtttttgccgcatattgaagatggtacggtcacttttattggc
gcaaccacggagaacccttcttttgagcttaataacgcgctgctttcccgcgcgcgggtt
tataagctcacctcactcaatcaacaagaaattctgcaagctctgcatcaagcgattgcc
gatactgaacgcgggcttggcaaagtggcggcggtatttgctgataatgttttagatcgc
ctagccgaactggtcaatggcgatgcgcgcatgtcgctcaattatcttgaactgctgtac
gacatggctcgcgaagatgatcagggacgcaagcagattgatctgcctttattggctgaa
gtcgctggtgaaaaagtgtcgcgctttgataacaagggcgatatttggtatgacctgatt
tccgctgtacacaaatcgattcgaggttccgatcccgatgcagcgctgtactgggcggcg
cggatgatttccgcaggctgtgaccctttgtatatcgcgcgccgtctgctcgcgattgcc
tctgaagatgttggtaatgccgacccacggggcatgcaagtggcactcgcagcgtgggat
tgctttacccgtgtggggcctgcagaaggcgagcgcgcgattgctcaagcgattgtctac
ctcgcctgcgcaccgaaaagcaacgcggtgtacaccgcgtggaaacaagcgctgtcggat
gcgcataatctgcctgagtttgaagtaccgccgcatctgcgtaatgccccaacgcgattg
atgaaagatctcggttatggtgaggaataccgttacgcccatgatgaaccgggcgcttat
gctgcaggggagtgctatttcccaccagaaatgagtggaactcgctactatcagcctact
ccacgcgggctagaaactaagattgccgaaaagttagcgtatctggcggatttgaacgca
aaaagcccacaaaagcgctatgaaaagtag
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