Vibrio cholerae O1 El Tor FJ147: IR04_11065
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Entry
IR04_11065 CDS
T03827
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcf03000
]
IR04_11065
Transcription factors [BR:
vcf03000
]
Prokaryotic type
Helix-turn-helix
Other families
IR04_11065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
HTH_29
Penicillinase_R
MarR
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AJZ99667
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Position
I:complement(1302434..1303288)
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AA seq
284 aa
AA seq
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MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPVQINR
AVDLLTQAKRISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTDNDVIV
LISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSICLDVPEDTDVYMPMASR
VVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSRYDKLPPY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagaaaaaattcaaaaaaacctggaaaactttagcaagtctgagcgtaag
gttgccgaagtgattatggcatcaccacaaaccgctattcattccagcattgctacactg
gcgaaaatggcggacgtgagtgaacctacggtgaaccgtttctgtcgccgccttgatacc
aaaggttttccggactttaaactgcatttagctcaaagccttgcaaacggcacgccttac
gttaaccgtaacgtagaagaggatgatggcccagatgcttacacccacaagattttcgaa
tcgactatggcgtgtctggatgtggcgaaaaacagtttggatcccgtgcaaatcaaccgt
gctgttgacctgctcactcaagcaaaacgtatttcgttttttggcttaggcgcgtcctct
gcggtcgcacgcgatgcacagaataaatttatccgcttcaatattccgatcagctgcttt
gaagatattgtgatgcagcgaatgagctgtatcaactgcaccgataatgatgtgattgtg
ctgatttctcatactggccgtaccaaaagtcaggttgaaatcgccaatcttgctcgtgaa
aacggagcaacggtgatcgcgattaccgctaaagattcaccactggacaaagccagttca
ttatcgatctgcttagatgtgcctgaagacacagacgtgtatatgccaatggcaagtcgc
gtagtgcaaatgaccgtgatcgatgtattggcaaccggctttacattgcgccgaggttca
ggctttagagaaaatctcaagcgcgtgaaagaagtgctgaaagattctcgctacgacaaa
ctgccgccttactag
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