Vibrio cholerae O1 El Tor FJ147: IR04_11305
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Entry
IR04_11305 CDS
T03827
Name
(GenBank) membrane protein
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00310
Lysine degradation
vcf01100
Metabolic pathways
vcf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
IR04_11305
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_9
Fer4_10
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
AJZ99714
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All DBs
Position
I:1353609..1356644
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AA seq
1011 aa
AA seq
DB search
MLPRLHHQSDVDPVVLTFLHELKTAGFTGDIETQYSSRLAVATDNSVYQQLPQAVVHPKS
TADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLTKGVVVDLSRHMNRILEINPQEGWV
RVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDASGQGSLQYGKTSDHVLSL
QAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQIVAKFPPLNRFLTGYDLK
NALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLVNVKYDSFDSALRNAPLM
VEAKALSVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQGINMVEYAGQDSAQINQQV
AQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAVGLLGAAKGRAKPVAFTEDT
CVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPALDLCDPKQELLMREISDQV
VKLVAKYGGLMWGEHGKGYRSEYGPEFFGEELFTELRRVKAAFDPHNKMNPGKICTPLDT
PFELVKVSDTKRGFYDRQIDVKVRDSFKQAMECNGNGLCFNYETSSPMCPSMKVTADRRH
SPKGRAGLVREWLRQLTEQGIDILDLEKATLESSPTIKSMLDRVRHAFSKDKEYDFSHEV
YEAMNGCLACKACASQCPIKVDVPSFRSRFLNIYHSRYPRPVKDYLVANIETLLPVMAKA
PQLVNSVLAQSSVQKLTAKTVGYVDAPLLSVPTLAQRLRRHPVVLFDMQRLAGLSQEERE
QHVLIVQDPFTSYYDADVVEDFVALLLKLGKKPVLLPFKPNGKAQHIKGFLRQFRSTAAN
TAAFLTQVADLNIPLVGVDPALVLCYRDEYVEILGKERGEFSVLTVHEWLKPRLSQFTPQ
VTDAQPWYLLAHCTEKTKLPNAEKEWVEIFRHFGTQLNAVAVGCCGMAGTFGHEVDKLTM
SRDIYDLSWQPALASLPKERCLVTGYSCRSQVKRFEQIKPKHPLQALLHLL
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaagactccatcaccaatccgacgttgatccggtggttttaacttttttacac
gagttaaaaaccgcaggatttaccggcgatattgaaacccaatactccagccgtcttgcg
gtagcgacggataacagcgtctaccaacaattgcctcaagcggtcgtacatcctaaatcc
accgctgatgttgttcttataggaaagattagttcaaaaccagaatttgagagagtgact
ttttcacctcgtggtggcggtacgggcacgaatggtcaatcgctgactaaaggggtggtc
gttgatttgtcgcggcatatgaatcgtatcctagaaattaacccgcaagagggatgggta
cgagtgcaggcgggggtcattaaagatcaactcaatgatgcggtacgcccacacggtttt
ttcttctctccggatctttcgaccagtaatcgcgcgacgcttggcggcatggttaacacc
gatgcttcagggcaagggtcgctacaatatggcaaaacgtcggatcacgtactctcgctg
caagcggtatttgccgatggttctttgctggaaaccgatctctcgcaaggtttgcctgct
cccaatacgtttgctgcgcaagcgatgcaagtcacggagcaggtttgccgcaccaaacgt
aagcaaattgtcgcgaaatttccgccgctcaaccgctttttgactggatacgatttaaaa
aatgccctaaatgaagccgaagatcgctttgatatcacgcgggtgttgtgtggtgcagaa
ggctcactggcgtttattaccgaagctaaactcaatttaacgcctatccccaaagcacgc
acgttagtgaatgtgaaatacgacagctttgattctgcactgcgtaatgcgcctttaatg
gttgaagcgaaagctttgtcggtagaaaccgttgactcgaaagtgctcaatcttgccaaa
gaagacattatttggcacagcgtaaaagacttgctgactgatgtgcctggcaaagagatg
caaggcatcaatatggtcgaatacgcaggccaagacagcgcgcagattaatcagcaagtc
gcacaattaaccgcgcgccttgatgagatgatggccaaccaacaagcgggaattattggc
tatcaagtctgtagtgatttagcgagcatcaaccgcatttacaatatgcgtaaaaaagcg
gtgggcttgctcggtgcagccaaaggccgcgctaaaccggttgcctttaccgaagatacc
tgtgtgccgcctgagaacttagccgattttatcgttgaatttcgcgcgctgctcgattcc
aaaaatctggcgtatggcatgtttgggcatgtggatgcgggcgtattgcatgtgcgtcct
gcgcttgacttgtgcgatcccaagcaagaattgttgatgcgtgaaatctccgatcaagtg
gttaagctcgtcgctaaatatggcggtttgatgtggggggagcatggcaaaggctatcgt
tcggaatatggccctgaattttttggtgaggagctgttcactgaactgcgtcgtgtgaaa
gcggcgtttgacccgcacaataagatgaatccgggcaagatttgtaccccacttgataca
ccgtttgagctggtgaaagtctccgacactaaacgtggtttttacgatcgccaaatcgac
gtcaaagtgcgcgacagctttaagcaagcgatggagtgtaacggtaacggtttgtgcttt
aactacgaaactagctccccgatgtgtccttcaatgaaggtgacggcggatcgtcgccac
tcgccgaaagggcgcgcaggattagtgcgagaatggttacgtcaactgacggagcagggt
attgatatcctcgatcttgaaaaagccacgctcgaatcctcgccaacaattaaatctatg
ctagatcgggttcgtcatgcttttagcaaagataaagagtacgacttttcgcatgaagtg
tacgaagcgatgaatggttgcttggcctgtaaggcctgtgcaagccagtgtccgattaag
gtggatgtgcccagtttccgttcgcgttttctgaatatctatcacagccgttatccgcgc
ccagtcaaagattatttagtcgcgaatatcgaaaccttattacctgtgatggcgaaggct
ccgcaactggtgaatagtgtgttagcacaatcttcggtgcaaaaattaaccgctaaaacg
gtgggttatgttgatgcgcctctcttgtcggtaccaacactcgcacagcgtttacgccgt
catcccgtcgtcctgtttgatatgcagcgtttggcggggttatcgcaagaagagcgcgag
caacatgtgttgatcgtgcaagatccgtttaccagttattacgatgcggatgtggtcgaa
gattttgtcgccctgctgcttaaattaggcaaaaaaccagtattgttgccgtttaaaccc
aatggcaaagcgcaacatattaagggctttctacgccaatttcgttcgacggcagcgaat
accgcggcatttctgactcaagtggcggatctcaatattccgctcgtgggtgtagatcct
gctttggtgctttgctatcgcgatgagtatgttgaaatattaggcaaagagcgcggtgag
ttttcggttctgacggttcatgaatggctcaaaccacgcctgtcgcagtttacgcctcaa
gtaaccgatgcacagccttggtacttattggcgcactgtacggagaaaactaagctgccg
aatgcggaaaaagagtgggtggaaatcttccgccactttggtacgcagctcaatgcggtg
gcggtagggtgctgtggtatggcgggtacctttggtcatgaggtggataaattaaccatg
tctcgcgatatttacgatttgagttggcaacccgcattagcgtcgctaccgaaagagcgc
tgtttggtcaccggttactcgtgtcgtagccaagtgaaacggtttgagcaaatcaaacct
aagcatccgttgcaggctctgttacacttgctataa
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