Vibrio cholerae O1 El Tor FJ147: IR04_11750
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Entry
IR04_11750 CDS
T03827
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf03030
DNA replication
vcf03430
Mismatch repair
vcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IR04_11750
03430 Mismatch repair
IR04_11750
03440 Homologous recombination
IR04_11750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcf03032
]
IR04_11750
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_11750
Enzymes [BR:
vcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IR04_11750
DNA replication proteins [BR:
vcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IR04_11750
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IR04_11750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
AJZ99796
LinkDB
All DBs
Position
I:complement(1451915..1452616)
Genome browser
AA seq
233 aa
AA seq
DB search
MFDSAIYWPARFAHLAQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAEQDA
IVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQHAQAPEQVLKELLE
ALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQRSLWQRIARRP
LPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAYHLPPHTAIQSLWL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattctgcgatttactggcccgctcgatttgctcacttagcccagcaggctcgg
caaacccatttacagcgcttttatgctcaacctctggttgaaggctcaacaccgattcat
cagtgctcactggttgccctcgattttgaaacaacgggactgaatgccgagcaagatgcc
attgtgagtatcggtttagtgccttttactactcaacggatttttcttagtcaagctcgg
tattggttagtaaaaccctctcaaccgcttgaagatgagtcgatagtgttccatgggatc
acgcactccgagttgcagcatgcgcaagctccagaacaggtgttgaaggaattactcgag
gcgctgcacggcaagattgtcgtcgtacactttaggcatattgaacgtgattttttgcgc
cagattagcctgaatatatggggcgaggcgatcgagtttcccgtgttggatacattagaa
attgaacgtcagttactggataagcaacgctcgctgtggcaacggattgcacgtcgacct
ttaccctcaatacgccttgggcaatcacggatgcgttatcacttaccgccctactcacct
caccatgcgctgacggatgccattgcgaccgcagaactttttcaagcgcagtgcgcgtac
catctcccaccccacaccgctattcagtctttgtggctttag
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