Vibrio cholerae O1 El Tor FJ147: IR04_11855
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Entry
IR04_11855 CDS
T03827
Name
(GenBank) alanine racemase
KO
K25317
amino-acid racemase [EC:
5.1.1.10
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00260
Glycine, serine and threonine metabolism
vcf00270
Cysteine and methionine metabolism
vcf00310
Lysine degradation
vcf00470
D-Amino acid metabolism
vcf01100
Metabolic pathways
vcf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IR04_11855
00270 Cysteine and methionine metabolism
IR04_11855
00310 Lysine degradation
IR04_11855
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IR04_11855
Enzymes [BR:
vcf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.10 amino-acid racemase
IR04_11855
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Lin0512_fam
PapC_N
DUF6638
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AJZ99816
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Position
I:complement(1477008..1478231)
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AA seq
407 aa
AA seq
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MHFKATLLSLSIAATLPSFSLSAAPLHIDTALPDAAQIQQSNSWLEISLGQFQSNIEQFK
SHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNAEARAVRESGFKGELIRV
RSASLSEMSSALDLNIEELIGTHQQALDLAELAKQSGKTLKVHIALNDGGMGRNGIDMTT
EAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKESSTWLMQQANLKREEITL
HVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPEYPSIVSFKTRVSSLHHLPKDSTVGYD
STFTTSRDSVLANLPVGYSDGYPRKMGNKAEVLINGQRAKVVGVTSMNTTVVDVTEIKGV
LPGQEVVLFGQQQKQSIAVSEMENNAELIFPELYTLWGTSNPRFYVK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcattttaaagccacgctgctttctctctctatcgcggcgactttgccttctttctct
ctctctgctgcgccattacacatcgacaccgctttaccggatgccgctcaaattcagcaa
agtaattcttggctggagattagcttaggccaattccaaagcaacattgaacaattcaaa
tcacacatgaacgccaacaccaaaatttgcgccatcatgaaagccgacgcttacggtaac
ggtattcgtggtttaatgccgaccattatcgcgcaaggcattccttgtgtgggggtggca
agtaatgcagaggcgcgtgcggtgcgtgaaagtggctttaaaggtgaactgatccgtgtg
cgctctgccagcctaagtgaaatgtcctcggcactcgatctcaatatcgaagagctgatt
ggtacccaccaacaagccctcgatctggcggagcttgccaaacaaagtggtaaaacgctc
aaagttcacatcgcgctgaatgacggcggcatgggccgtaacggcattgatatgaccacg
gaagccggcaagaaagaagccgtctctattgcgactcaaccttcgttgagtgtcgttggc
attatgacccacttcccgaattacaatgcggacgaagtgcgcgcaaaactggctcaattc
aaagagagctcaacttggctaatgcaacaagccaatttgaaacgtgaagagatcacactg
catgttgcgaactcttacaccgcgctcaatgtgccagaagcacaactggacatggttcgt
ccaggtggcgtgttgtttggtgatttgccaaccaaccctgaatacccatcgattgtttct
ttcaaaacacgtgtgtcttcgctgcaccatttgccaaaggactcaactgtgggttatgac
agtacttttactaccagccgtgacagtgtgctggcgaacctgcctgtgggttattctgat
ggttacccgcgcaaaatgggcaataaagccgaagtgctgatcaatggacaacgcgccaaa
gtcgtgggagtgacatcgatgaacaccactgtggttgatgtgaccgagattaagggcgtg
ctccccggtcaagaagtggttctgtttggtcagcaacagaagcaaagcatcgcggtcagt
gagatggaaaacaacgctgagctgattttccctgagttgtatacgctgtggggaaccagt
aacccacgtttctacgtgaaataa
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