Vibrio cholerae O1 El Tor FJ147: IR04_12365
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Entry
IR04_12365 CDS
T03827
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IR04_12365 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_12365 (potD)
Transporters [BR:
vcf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
IR04_12365 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Lipoprotein_8
SBP_bac_11
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
AJZ99913
LinkDB
All DBs
Position
I:complement(1606327..1607358)
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AA seq
343 aa
AA seq
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MKKLATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYE
SNETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDP
NNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLG
YSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGL
PIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASN
DKFQDVAPLFPSQEDLDRVEWQSAVGDKTVKYEEYFMKLKAGQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactggctactcttttagcaggtagcgcatgtgcgctttctctgttgtctggc
acagcggcagcggaagataaggaactggtgtttatgaactggggaccgtatatcaatagc
ggtatcctagaacagttcaccaaggaaacgggaatcaaagtgatttactcaacttatgag
tcaaatgaaactttgtatgcaaaactcaaaacgcacaatcaaggttatgatctggtagtt
ccttctacctacttcgtggcaaaaatgcgtgatgaagggatgctgcaaaaaattgacaaa
tctaagctgagcaacttcaaaaacctagattccaactacctagataaaccttacgaccca
aacaacgactactcaattccacacgttgtagcaattaccggtctcgcggttaataccgac
atgtatgatcctaatgacttccaaagttggggcgatctatggaagcctgagctaaaaggt
caactgatgttgatggatgatacgcgtgaagtattccatatcgctctgcgtaaactgggt
tactcaggtaactcaacggacgacaagcagattgatgaagcgtatgccgagctacaaaag
ctgatgccaaacgtactggttttcaactctgataaccctgcagctccttacctttcaggt
gaagtaggtcttggtatgctgtggaacggctcagcagcggcggcacagaaagaaggttta
ccaatcaagctagtcttcccgaaagaaggcggtatcggttgggttgataacttcgccatc
tcttctggtgccaaaaacgtcgatgcagcacacaagatgatcgatttcttgttacgtcct
gaaattgcagagcaaatttcacgcgacacaggttatctgactggcgttaaagcctcaaac
gacaaattccaagatgtcgcgccactgttcccatctcaagaagatctggaccgtgttgag
tggcaatctgccgttggcgataagacagtgaagtatgaagagtacttcatgaagttgaaa
gctggccaataa
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