Vibrio cholerae O1 El Tor FJ147: IR04_12375
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Entry
IR04_12375 CDS
T03827
Symbol
potB
Name
(GenBank) spermidine/putrescine ABC transporter permease
KO
K11071
spermidine/putrescine transport system permease protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IR04_12375 (potB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_12375 (potB)
Transporters [BR:
vcf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
IR04_12375 (potB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SyrA
Motif
Other DBs
NCBI-ProteinID:
AJZ99915
LinkDB
All DBs
Position
I:complement(1608231..1609088)
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AA seq
285 aa
AA seq
DB search
MSKKLNLQNAIVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLLDPL
YGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGL
KIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTY
IEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVI
KSQVLNARDWPFGAATSIALTLAMAIMLYAYYRAGKLLNKKVELD
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaagcttaatctacaaaatgcgattgttaccttaatcgtaggttggttagtg
ctgtttgtactgatccccaacctgatgattattggtacgagttttctgactcgtgatgaa
gcgaacctgattaagtttgcattcacctttgaaaactacacgcgtctgcttgatccacta
tacggaaaagtgatgctgcactcgttctacatggcgattgttgcaacattaatctgtcta
gtgattggttatccttttgcgtacatagtggcgaaaatgcctgaaaaatggcgtccattt
atgctgtttttgattattgttcctttctggaccaactcactcatccgcacctatggttta
aaaatcgtactcggcacgcaaggtattcttaatcaagcgctaatgtctctgggccttatt
gatgcaccactgcgcattatgtttaccgaaacagccgtcatgatcggtctggtttacatt
ttgttgccatttatgatccttccgctctattcggctatcgaaaaattggatggcacttat
attgaagcggcgcgcgatctcggtgccaacaagtttcaaactttggttcgcgtgatttta
ccgctgactatgcctggcattattggtggttgtttgctagttctgctccctgccctcggt
atgttctacatcgctgacctactcggcggtgcgaaaaacctgctgatcggtaacgtgatt
aagagccaagtactcaacgcccgtgactggccatttggtgccgcaaccagtattgcactg
actctggccatggcgatcatgctgtacgcctactatcgtgcaggtaaacttttgaataag
aaggtggagctagactaa
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