Vibrio cholerae O1 El Tor FJ147: IR04_13175
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Entry
IR04_13175 CDS
T03827
Name
(GenBank) diguanylate cyclase
KO
K20954
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IR04_13175
Enzymes [BR:
vcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
IR04_13175
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
GGDEF_GdpP
VP4_helical
GGDEF_2
Salyut
Motif
Other DBs
NCBI-ProteinID:
AKA00069
LinkDB
All DBs
Position
I:1787979..1789199
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AA seq
406 aa
AA seq
DB search
MIAVSIVLINTPKLLFEDKIHAYEKEQLQLTVELQKTRIDYASLILEHLETHSLTPQLQE
FFNLYHGNLCVLDENSPQQCPLSIIDAVQSTTSASDFVASTSVNITFAEGSILFFQVQGK
QIRVLWFNHASFWPAPQKNISLVLVRGNHIQFLDNPIAHYNALLNYTILRHRDDYGTLQF
ENMELSFLRWNLGEYQLISVFNDKVRLFNLIYWVMSASLTLLLTLTWFLTRLNLQKVAAQ
RHVYIDNLTRLNNRHFLNKISTKFIEHPHSIAAMIDIDHFKKINDQYGHITGDRILQAVA
SCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKDDHSLYGTTISIGFT
FIDGSLPAAISRADTALYQAKEAGRNQVVADSEKENDSAADLPIQC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggtcagcatagtattgattaacacgcctaaattattgtttgaagataagatc
cacgcttatgaaaaagagcaattgcaactgactgtcgaactacagaaaacccgtattgac
tacgcaagcctaattctagaacatctagaaacccactcattgactccacagttgcaagaa
ttcttcaatctgtaccatggcaatttatgtgtgctggatgagaattccccacaacaatgc
ccgttgagcattatcgatgcggttcaatccaccacttcagcaagtgattttgtcgcttct
acctcagtaaacatcacgtttgcagaaggttctatcctattttttcaagtgcaaggcaaa
cagatccgagtgctatggttcaaccatgcttcattttggccagcaccacagaaaaacatc
agcttggtcttggttcgcggtaatcacattcagttcttagataatccgattgcacactat
aacgctctactgaattacacgattttgcgccaccgagatgattacgggactttgcagttt
gaaaacatggagttgagctttcttcgttggaaccttggtgaatatcaattgatcagtgtg
tttaacgacaaagtacgcttgtttaatcttatttactgggtaatgtcggccagtttaacc
ctgttactgactttgacttggttcctcactcgactcaatctacaaaaagtagcggcgcag
cgtcatgtttatatcgacaacttaactcggctcaataaccgacattttctgaataaaatc
agtactaagtttattgaacaccctcactccattgccgcgatgatcgacatcgatcacttt
aagaaaattaatgaccaatatgggcacattaccggagatcgcattctacaggcggtggcc
tcttgtctgcgcaaaaatgtccgagatggagacaccattatccgctttggtggagaagag
tttttactattgttccaagcccattcaaacaaagaagcttggtacatgctcgaccgattg
cgtcagcgagttaaagacgatcatagcttgtacggaacaacgatttcgattggttttact
tttatcgatggtagtttacccgctgctatttcgcgggcagatactgcactctatcaagca
aaagaagcaggacgtaatcaagtggttgccgacagcgagaaagagaatgactcagcagca
gatttaccgattcagtgctga
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