Vibrio cholerae O1 El Tor FJ147: IR04_13480 Help Entry IR04_13480        CDS       T03827                                  Name (GenBank) diguanylate phosphodiesterase   KO K13246   c-di-GMP phosphodiesterase [EC:3.1.4.52] Organism vcf  Vibrio cholerae O1 El Tor FJ147 Pathway vcf05111   Biofilm formation - Vibrio cholerae Brite KEGG Orthology (KO) [BR:vcf00001]  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     IR04_13480 Enzymes [BR:vcf01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.4  Phosphoric-diester hydrolases     3.1.4.52  cyclic-guanylate-specific phosphodiesterase      IR04_13480 SSDB OrthologParalogGFIT Motif Pfam:  EAL Response_reg GerE Sigma70_r4_2 Sigma70_r4 HTH_23 Sigma70_ECF Terminase_5 Motif Other DBs NCBI-ProteinID:  AKA00127 LinkDB All DBs Position I:complement(1864260..1866005) Genome browser AA seq 581 aa AA seqDB search MIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDGISL LSQLSLQAPKLGVVIFSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEGFQK QTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTHGML SPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPILAIC ERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPF TELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQ GYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQILLVDNHMLSATALQKVLNKEENVS KVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGALLVLHDGLTAE AQEDEPKAIVVKANTLMETSSRILLQAQQSNVRPQAQQEELAQLSERELTVAKMLVEGLT NKEIALQLDINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atgatagtagaagatgatcgaattcaggcgactagcctgaagctcaagctaagacagctt gggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactgtgtaacaaa gtgggtatcgatttgatgttttgcgatattcgaatgccgcagatggatgggatcagtttg ttatcacaactgagtttacaggcacctaagctaggtgtggtgatattcagcgctgtggaa gatacgattcttgagttaacccacaacatgtgtagtttggctggatttgcttatgttgat cgcctacctaagccctacgaagtggaggatttacagcgtgttgtcgaggggtttcaaaag caaacggagcccgaaaccagtcacaaacctgcaatcacgctaacctgtgacgagattgaa caagcttttctgcacgaccatatttttaattactatcaaccacagtttgattttcgcagt ggggcgatggtcggcgttgaagcgctagtacgttacgagcacccaactcatggcatgtta agcccagcagtgtttctgcctttaattgagcagtgtggcttgcatgagaaactcttcctt accgtattagaaaagtcggtctctgcactggccagtattggtgctgacttgcagctttcc gtcaacatcagccagcgcaacttgcaacactcaatctgtgatcccattctcgccatctgt gagcggtatggttttcccgcaagcaaactgactctagagatgacggagcatgaggtgtac aacggaaccccgacctcattggccaaccttgctcgactgcgaatgtatggcgttgggcta tcgattgatgattttggtacgggttacgcgtcattaggtcaactggctcaactgcctttt acggaactcaagattgatcgcagctttgtgcatgacttggcaaccaactacaaacaccaa caattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgcgtcgtcgaa ggggtagagaacgaagaaacatggcaatacttgcgtcaacttggggtagatacttgccaa ggttactacgccgctaagcccatgccgattgctcagttgagcgaactttacactaaaaat cgtcgtcagtgtttaggttgtcaaagcatggatgatggctggcaaatcttgctggtggat aaccatatgctcagcgccacggcattacaaaaagtgctcaataaagaagagaacgtcagc aaggtgtttgtggcgcaagatattgagcagacgctgcacaaactgcgcgatttaccgatc aacctgctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggcatttcacgag ttgcttgagccttactatcgaggggcgctcttggtgctgcatgatggattaaccgctgaa gctcaagaggatgagcccaaagccatcgtcgtcaaagcgaatactttgatggaaaccagc tcccggatcttactgcaagcgcagcagagcaatgtgcgcccacaggcgcaacaagaagag cttgctcagctttctgagcgagagttgacggttgcgaaaatgttagttgaaggtctaacg aataaagaaatcgccttacaactcgatatcaaccaaaaaacagtaagcacttacaagact aggattatgaccaagttagggattaaatcggccatggaattggtgcgttttgtaacatta aaatag

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