Vibrio cholerae O1 El Tor FJ147: IR04_13945
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Entry
IR04_13945 CDS
T03827
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K03442
small conductance mechanosensitive channel
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_13945
Transporters [BR:
vcf02000
]
Other transporters
Pores ion channels [TC:
1
]
IR04_13945
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Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
GNAT_acetyltran
YwpF
FeoB_Cyto
Motif
Other DBs
NCBI-ProteinID:
AKA00215
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Position
I:complement(1968954..1970663)
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AA seq
569 aa
AA seq
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MKPRWSWVALLLLMATSAFASDTSQENTQIETTTEITTTAESPSELENEIDQIKQYISEL
SVTLKQATGDVRDALQLQLFQKNAELRKSLSKAVEEKTIAKEKLVELVNIQQRYTEEANH
YISERLNSLDDSLGKASHEEKLSYITTYRELQQYLDVTYHSSAENIGWLSSLDIDTRDVE
KTLRERINQRLRLLSASLEYLKQQISVINNQIKSSPESEKANLQLALLFTQQRLDIVTKS
LRSVVGIADQFEIETADYKRQIFQVTGSITQDLLNTQVVFSIVRHWSNSLVNWLASNAVQ
HLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVSMSGKVVWVIGILV
GLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGK
VSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAV
LTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVYWDVTKEVKLRFDRE
GISIPFPQQDVHLHLVDQKAFIPPTQPTS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacgttggagctgggtagcattattgcttctgatggcaaccagtgctttcgcg
agtgacacgtcgcaagagaatacccaaatcgagactactactgagataacgactacggca
gagtcgccctctgagcttgaaaatgagattgatcagataaagcaatatatcagtgagttg
tcggtgacgctaaagcaagcaacaggcgatgtacgtgatgctttgcaacttcagctgttt
caaaaaaatgccgagttaagaaagagcctttccaaagcggtggaagaaaaaacaattgcc
aaagaaaagctcgtcgagctggtgaatatccaacaacggtataccgaagaggcgaatcac
tacatttccgaacggttgaattcgttggatgacagtctcggcaaggcatcccatgaagag
aaactctcttatatcactacctatcgggagttacagcaatatctggacgtgacttaccat
tccagcgcagaaaatattggttggctcagtagtttggatatcgatacccgtgacgttgag
aagacattaagagagcgaatcaatcaacgcttacgtctactgtcggcttcattagagtat
ctaaagcaacaaatcagtgtgatcaataaccagatcaaatcaagcccagagtctgaaaag
gccaacttacaattggcgctcctttttactcagcagcggctggatattgtcaccaaaagc
ctacgttcagtggtggggattgccgatcaatttgagatagaaaccgccgactataagcga
cagattttccaagtgacgggcagtattactcaggatttgttgaacactcaggtggtattt
tcaattgttcgtcactggtcaaattcgctggtcaactggctggcaagtaatgcggttcaa
cacctattccaactctttatctttttattgattctactggcggcgaagggcggagcgaaa
gtgactcgcactgtagtacgttctgctgtgaactcgaaaaacatccgtatctctcatttg
atgcaggatttctttgtttctatgtccggcaaagtagtgtgggttatcgggattttggtc
ggcttatcgcagattggtctcaatctcgcgccagtattaaccggttttggtattgcaggg
gtgatcattggtttcgcgttgcaagatactttgtctaacttcgcagcaggcatgatgtta
ctgatttaccgaccatttgatgtgggggattttgtgcatgcgggaggtgtggatggcaaa
gtgagccacatgagtttggtcaataccacgattcgtacgttcgataaccagatcattatt
gtgcccaatagcaaaatttggggggatgtgatcaaaaacgttacccatgaacggatccga
cgagtcgatatggtgtttggcattgggtatagcgatgatttgcttaaagcagaagcagta
ctgaccgatatcgtaaagtcgcatcccgcagtgctaaaaacacctgagccgaatatcaaa
gtgcatacgcttaacacctcatcgattgactttatcgtgcgtccttgggtgaaaaccgac
gattactgggatgtgtattgggatgtcactaaagaagttaagctgcgctttgaccgggaa
ggtatttctattcctttcccacaacaagatgtgcatttgcatctggtggatcaaaaagcc
tttatcccacctacacagcccacttcttag
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