Vibrio cholerae O1 El Tor FJ147: IR04_14435
Help
Entry
IR04_14435 CDS
T03827
Name
(GenBank) porin
KO
K10940
outer membrane protein OmpT
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IR04_14435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_14435
Transporters [BR:
vcf02000
]
Other transporters
Pores ion channels [TC:
1
]
IR04_14435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
DUF2490
Motif
Other DBs
NCBI-ProteinID:
AKA00306
LinkDB
All DBs
Position
I:complement(2076014..2077048)
Genome browser
AA seq
344 aa
AA seq
DB search
MKKTLLALAVLAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAGVD
ANYTVNDSLALQGKVEFALKDSGDMYVRNHILGVKTNFGKFSFGKQWTTSDDVYGADYSY
FFGGTGLRYGTLSDALHDSQVKYVYEADSFWVKAGYGFPEDNAKQELAELYVGATFGDLA
VHAGGGQNRDKAFKVGSNTVGTTTTDIKADVTNSYFEVTGEYTIGDALIGVTYYNAELDV
ENNPLVIDEDAISVAGTYKVADKTKLYAGYEYVMQEANTGADEDGTLVYLGVEYKFASWA
RVYAEYGYGDGTTLGYTNKGSDAEVKATKVDSANNFGIGARIYW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactctattagcactcgcagtgcttgcagccgcaggctctgtaaacgcagct
gaaattctaaaatcagatgctggcacagttgatttttacggtcagctacgtacagaattg
aaattcttagaagataaagatccaacaattggttctggttcttcgcgcgctggtgttgat
gcaaactacaccgttaacgatagcttagcgttacaaggtaaagtggaattcgcactaaaa
gacagtggcgatatgtatgttcgtaaccacattcttggtgtaaaaactaattttggtaag
tttagctttggtaaacaatggactacatctgacgatgtatacggtgctgactactcttat
ttctttggtggtacaggtcttcgttacggcacactgtctgatgcactacacgattctcaa
gtcaagtatgtttacgaagctgacagcttctgggttaaagctggttacggttttccagaa
gataatgcaaagcaagagctagcagaactgtatgtaggtgcaacatttggtgatttggct
gtgcacgctggtggtggtcaaaaccgtgataaagcattcaaagttggtagtaatacggtt
ggcacaacaaccacagatattaaagctgacgtaacaaatagttactttgaagtgacaggt
gagtacactattggtgatgcactgattggtgttacttactacaacgcagaactagatgta
gaaaataacccactagtgatcgatgaagacgctatttctgttgctggtacatacaaagtt
gctgacaagacaaaattgtatgctggctatgagtatgtaatgcaagaagcgaacactggc
gcagatgaagatggtactcttgtttacctaggtgttgaatacaaatttgcaagctgggct
cgtgtatatgctgagtatggctacggcgatggtacaactctgggttacaccaacaagggt
tctgacgcagaagttaaagcaacgaaagtcgacagcgctaataactttggtatcggtgct
cgtatctactggtaa
DBGET
integrated database retrieval system
