Vibrio cholerae O1 El Tor FJ147: IR04_14730
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Entry
IR04_14730 CDS
T03827
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcf03032
]
IR04_14730 (ihfB)
03036 Chromosome and associated proteins [BR:
vcf03036
]
IR04_14730 (ihfB)
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_14730 (ihfB)
DNA replication proteins [BR:
vcf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IR04_14730 (ihfB)
Chromosome and associated proteins [BR:
vcf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IR04_14730 (ihfB)
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IR04_14730 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF4777
HU-CCDC81_euk_2
Glycos_trans_3N
Ybfg_C
Motif
Other DBs
NCBI-ProteinID:
AKA00363
LinkDB
All DBs
Position
I:complement(2146535..2146813)
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AA seq
92 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtccgaactgatagaaagactctgtgccgaacaaacgcacttgtctgcgaaa
gagatcgaagatgcggtaaaaaatatccttgagcatatggcctcaacgttagaagcgggg
gagcgcatcgagattcgtggtttcggtagcttttccttacactatcgtgagccgcgtgta
gggcgtaatcctaagactggcgataaggtggagttggaaggtaagtacgttccgcatttc
aaaccaggtaaggaactacgcgaacgcgttaacttgtaa
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