Vibrio cholerae O1 El Tor FJ147: IR04_15560
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Entry
IR04_15560 CDS
T03827
Symbol
sucC
Name
(GenBank) succinyl-CoA synthetase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00020
Citrate cycle (TCA cycle)
vcf00640
Propanoate metabolism
vcf00660
C5-Branched dibasic acid metabolism
vcf00720
Other carbon fixation pathways
vcf01100
Metabolic pathways
vcf01110
Biosynthesis of secondary metabolites
vcf01120
Microbial metabolism in diverse environments
vcf01200
Carbon metabolism
Module
vcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IR04_15560 (sucC)
00640 Propanoate metabolism
IR04_15560 (sucC)
00660 C5-Branched dibasic acid metabolism
IR04_15560 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
IR04_15560 (sucC)
Enzymes [BR:
vcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
IR04_15560 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AKA00521
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Position
I:complement(2327363..2328529)
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AA seq
388 aa
AA seq
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MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKAGGV
ELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRR
IVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQGDQIKQFVKI
FMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLRQMHDASQEDA
REAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE
AFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLEGTNAELGRKV
LAESGLDIIAAVSLTDAAQKVVAAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcatgaatatcaagctaaacagctgtttgcagaattcggtttgcctgtaccg
gaaggttatgcttgtgatacgccacaagaagcgtttgaagctgcaggacgcatcagcaca
gccaagaaagtcgtaaaatgccaagttcacgcaggtggacgtggtaaagcaggtggcgtt
gaactgcatgacactaaagaaggcgtaaaagcgtttgcacaaaaatggctaggtaagaac
ctagtaacttatcaaacggatgcaaatggccaaccggtttcaaaaattttggttgaagaa
gcatcaaatatcgctaatgagctttatcttggtgcggtagttgaccgttctacacgtcgt
atcgttttcatggcatcgactgaaggtggcgtggaaattgagaaagtggcagaagaaact
ccagaactgatccacaaagcggcgattgatccactggttggcccacaagcctaccaaggt
cgtgaattggcgttcaagctaggcctgcaaggtgatcaaatcaaacagttcgtgaaaatc
ttcatgggcttgggtgaaatgtttgctcaatatgatctcgcactgctggaaatcaacccg
ctggtgattactgcggaaggtaacttgctgtgccttgatggcaaaatcaacatcgactcc
aatgctatgtaccgtcaacccaaactgcgtcaaatgcacgatgcttctcaagaagatgcg
cgcgaagcacacgcagcgaaatgggagcttaactacgttgcgctggatggtaacgtaggc
tgtatggttaacggtgctggccttgcgatgggtacgatggacattgttaacttgcacggc
ggaaaacccgcaaacttccttgatgttggtggcggcgcgaccaaagagcgtgttgcagaa
gccttcaaaatcatcttgtctgataccaatgtaaaagccgtactggtgaacatctttggt
ggcattgtgcgctgcgacatgattgcagaaggcattatcggtgcagtgaaggaagttggt
gtaagcgttccagtggttgtgcgtcttgaaggtacaaacgcagaacttggacgtaaagta
ctggcagaatcaggtctagatattattgcagctgtatctttgacagacgcagcgcaaaaa
gtagttgccgcggcggagggcaaataa
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