Vibrio cholerae O1 El Tor FJ147: IR04_15575
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Entry
IR04_15575 CDS
T03827
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00020
Citrate cycle (TCA cycle)
vcf00190
Oxidative phosphorylation
vcf00650
Butanoate metabolism
vcf00720
Other carbon fixation pathways
vcf01100
Metabolic pathways
vcf01110
Biosynthesis of secondary metabolites
vcf01120
Microbial metabolism in diverse environments
vcf01200
Carbon metabolism
Module
vcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vcf_M00149
Succinate dehydrogenase, prokaryotes
vcf_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IR04_15575 (sdhB)
00650 Butanoate metabolism
IR04_15575 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
IR04_15575 (sdhB)
00720 Other carbon fixation pathways
IR04_15575 (sdhB)
Enzymes [BR:
vcf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IR04_15575 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_18
Fer4_16
Fer4_4
Fer4
Motif
Other DBs
NCBI-ProteinID:
AKA00524
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Position
I:complement(2332839..2333549)
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AA seq
236 aa
AA seq
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MKLNFSLYRYNPDVDNKPYMKDYILEVEEGSDMMVLDALILLKEQDPSIAFRRSCREGVC
GSDGLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLI
ADDALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWL
IDSRDTATDERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLINRSV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaacttctccttatatcgctataatccggatgtcgataacaaaccctacatg
aaagactacattcttgaggtagaggaagggtctgacatgatggtgttggatgctttgatt
ctgcttaaagagcaagatccaagtattgctttccgccgctcatgccgtgaaggggtttgt
ggctcggacggtctgaatatgaatggtaagaatggcttagcatgtatcacacctttgtct
gcgttaaaaggtgacaaaattgtgattcgtccgctgccaggattacctgtggttcgtgac
ttgattgtcgacatgactcagttttacgataactatgcgaaagttaagcctttcttgatt
gcagatgatgcattacccccttcaagagagaacttgcaatccccagaagaacgggcgcat
ttggatggtctgtacgagtgtattatgtgcgcttgctgtaccacttcctgcccttcattc
tggtggaatccggataaatttatcggacctgcaggtttgttggctgcttatcgttggttg
attgatagccgtgataccgcgacagatgaacgcttatcgaatcttgatgatgcgtttagc
gtttttcgttgccacggcatcatgaactgtgtcagtgtttgtccgaaaggattaaaccca
acgaaagccattggacatattaagtccatgttgatcaatcgttcagtttaa
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