Vibrio cholerae O1 El Tor FJ147: IR04_15795
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Entry
IR04_15795 CDS
T03827
Name
(GenBank) Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02020
Two-component system
vcf02040
Flagellar assembly
vcf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IR04_15795
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IR04_15795
09142 Cell motility
02040 Flagellar assembly
IR04_15795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcf02022
]
IR04_15795
02035 Bacterial motility proteins [BR:
vcf02035
]
IR04_15795
Two-component system [BR:
vcf02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
IR04_15795
Bacterial motility proteins [BR:
vcf02035
]
Flagellar system
Flagellar assembly proteins
Others
IR04_15795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
HTH_20
MCM
AAA_16
MerR
HTH_24
HTH_11
AAA_7
AAA_19
HTH_28
FleQ
DUF2089
AAA_3
HTH_5
AAA
HTH_Crp_2
Sigma70_r4_2
HTH_10
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AKA00566
LinkDB
All DBs
Position
I:complement(2372000..2373433)
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AA seq
477 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGM
GGLALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAVVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNASPRKEGP
FIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVFPLTWPAL
CERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDNVVQRALILS
ENGHIQSEHILLEGVDWHDASSLQQAVAGESMAAPQIKPVAEPEVFKPLVQGGGQNSSSQ
SSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtcttaatcgtagaagatgacgaaggtcttcgcgaagcgttgatc
gacaccttagctttagcgggttatgagtggctggaagccgattgtgcagaagatgccctg
ctcaaactcaaatcacacagtgtcgatattgtggtgtctgatgtgcaaatggcaggcatg
gggggactcgctctgctgcgcagtatcaaacagcactggccgaatttacccgtactgctg
atgaccgcttacgccaatattcaagatgccgtatctgccatgaaagatggcgcgattgac
tacatggctaagccttttgcaccagaagtgctgctgaatatggtcagccgttacgcacca
gtaaagtcagatgacaacggcgatgctgtggtcgcggatacgaaaagcctcaagctgctt
gccttagccgataaagtggcgaagaccgatgccaacgtgatgattttggggccaagcggc
tcaggtaaagaagtgatgtcacgttacatccacaatgcctctcctcgtaaagaggggcca
tttattgcgattaactgcgcggcaattcctgacaacatgttagaagcaaccctattcggt
tatgaaaaaggcgcgtttaccggagccgtacaagcgtgtcccggtaagtttgaacaagcc
caaggtggcaccattttgctcgatgagatcagcgaaatggatctgaatctgcaagcgaaa
ctgctgcgggtactgcaagagcgtgaagtagagcgcttagggagccgcaaaagcatcaag
ctcgatgttcgcgtgctcgcaaccagtaaccgtgacttgaaacagtatgtgcaagccgga
catttccgtgaagacttgtactaccgtttgaatgtgttcccattaacctggccagcctta
tgtgagcgtaaagacgatattgagccgctggctaaccatctgattgagcgtcactgcaaa
aagttaggtttacctgtaccaagcattgcgcctaacgccattactaaactgctgaattac
ccatggccgggtaatgtgcgtgagctggataacgtcgtgcagcgtgctttgatcttaagt
gaaaacggccatattcaaagtgagcacattttgctggaaggggttgattggcatgatgcc
agcagcttacagcaagcggtggcgggagagtcgatggctgcgccgcagatcaaacctgtt
gcagagcccgaagtgtttaagcccttagtgcaaggtggtgggcaaaacagtagttcgcaa
agttcaggtttgggtggtgagctgcgcgaccaagagtttgcgattattcttgatacgttg
gccgaatgtcagggacgccgtaaagagatggcggagaagctaggtattagcccacgcact
ttacgttacaaactcgccaaaatgcgtgatgcagggattgatatccccggttga
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