Vibrio cholerae O1 El Tor FJ147: IR04_16240
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Entry
IR04_16240 CDS
T03827
Name
(GenBank) beta-N-acetylhexosaminidase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00511
Other glycan degradation
vcf00520
Amino sugar and nucleotide sugar metabolism
vcf00600
Sphingolipid metabolism
vcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
IR04_16240
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
IR04_16240
00511 Other glycan degradation
IR04_16240
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
IR04_16240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vcf03110
]
IR04_16240
Enzymes [BR:
vcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
IR04_16240
Chaperones and folding catalysts [BR:
vcf03110
]
Intramolecular chaperones
Others
IR04_16240
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Eco57I
Motif
Other DBs
NCBI-ProteinID:
AKA00639
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Position
I:complement(2454779..2457430)
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AA seq
883 aa
AA seq
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MLKKSLISIAVFTSLSGCALNTTSPQEVVDTLANNLDVQYQVVNNHGADTGLACQTLEAE
WASCNQVNMTLVNRGEAVNSKDWAIYFHSIRLILDVGNDQFKITRVTGDLHKLEPTDKFD
GFAAGETVTLPLIGEYWTLFETDFMPRAFVTAPDAEPKVIAALNTEDVASFVSGLEGENL
KRTPSDNNVFAQALSRFEKNSDVALQDVTHALIPTPLQVKSHSGSVSIAKGIALPSKAFD
GEQMQALNERAQLLGVNLKGVMPAQVIINPKSFKGDLAKSGAYRLAITDKAVKVTAFDQA
GAFYAMQSLLGLVDMADATQLPKVEIVDAPRFDYRGVMVDVARNFHSKQAILATLDQMAA
YKMNKLHLHLTDDEGWRIEIPGLPELTDIGAQRCFDPSETECVLPQLGSGPNADNFGSGY
FTKQDYLEILQYAKARHIEVIPEIDMPAHARAAVVSMEARYQRLMQEGNEAAANEFRLLD
PQDTSNVTTVQFYDRMSFINPCLDSSKRFVDKVISEIAAMHQAAGMPLTTWHFGGDEAKN
IKLGAGFQDVNTQEPVSWKGNLDLSKQDKPFARSPQCQNLIATGAVSDFGHLPSYFAEQV
SKLVAEKGIPNFQAWQDGLKYSEGEKAFATENTRVNFWDVLYWGGSASAYEWAEKGYDVI
ISNPDYVYMDMPYEADPKERGYYWATRATDTRKMFGFAPENLPQNAETSLDRDGNGFSGK
GEVKGKPFYGLSAQLWSETVRTDEQYEYMVFPRVLAAAERAWHRAEWENAYKVGVEYSQE
TQLVNHKALNADWNRFANVLGQRELAKLEKAGIDYRLPVPGAKIENGHLAMNVQFPGVTL
QYSLDGQTWLDYDAKQAPKVSGEVWIRSVSASGERTSRVTSLK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagagtcttatctcgatcgcggtattcacttcattaagtggctgcgcactc
aacactacgtcaccacaagaggtggtagacacattagcgaataacttggatgtgcaatac
caagtggtcaacaatcacggcgcggatactggtttggcttgtcaaactctagaagctgag
tgggcttcttgtaaccaagtgaatatgaccttggttaaccgtggtgaggcggtcaattca
aaagattgggctatttacttccacagtattcgcttgatcctcgatgtggggaatgaccag
ttcaaaattactcgcgttaccggcgacctacataaactggaacctaccgataagtttgat
ggttttgccgcaggtgaaacggtgactttgccgctgattggtgaatactggacgctgttt
gaaacggactttatgccacgcgcttttgtcaccgcaccggatgccgagccaaaagtcatt
gcggctttaaataccgaggacgtggcaagctttgtcagcggactggagggtgaaaacctt
aagcgcactccgagtgacaacaatgtattcgctcaagcgctgtctcgctttgaaaagaac
agtgatgttgcgctgcaagatgtgacacacgcactcatcccaacgccactgcaagtgaaa
tcgcatagcggatctgtctctatcgctaaaggtatcgcgctgccaagcaaagcgtttgac
ggtgagcaaatgcaagcgctgaatgagcgcgcacaactgcttggcgtgaatctgaaaggg
gtgatgccggcgcaagttattatcaatcctaaatcttttaaaggtgacttggctaaatct
ggtgcgtatcgcctagcgattacggataaagccgttaaagtgactgcatttgaccaagca
ggagccttctatgcgatgcaatcgctgctgggtttagtcgatatggccgatgccactcaa
ctgccaaaggttgaaatcgtcgatgctcctcgttttgattatcgcggtgtgatggtggat
gtagcgcgtaacttccactctaagcaagcgattctggcgaccttggatcaaatggcggct
tataaaatgaataagctgcatctgcacctgactgatgacgaaggctggcgtattgaaatt
ccgggcttacctgagctgacggatatcggcgctcaacgctgttttgacccgagtgaaaca
gaatgcgtgttgccacagcttggctctggtccaaacgccgataactttggctctggttat
ttcaccaagcaagattatttagagatcctgcaatacgcgaaagcacgtcatatcgaagtg
atccctgagattgatatgccagcgcacgctcgtgcggccgtggtttcaatggaggcgcgt
taccaacgtttaatgcaagagggcaatgaggcggcggccaatgagttccgtttgctggat
ccgcaagatacctctaacgtcaccacagtgcagttctatgatcgcatgagctttatcaat
ccatgtttggactcttccaaacgctttgtggataaagtgatctctgagattgcggcaatg
catcaagcggcgggtatgcctctgacgacatggcactttggtggcgatgaagcgaaaaac
atcaagcttggcgcaggcttccaagatgtgaatacccaagagccagtaagttggaaaggc
aacttggatctgagcaagcaagataagccatttgcgcgttcgccgcagtgccaaaacttg
attgcaacaggtgcggtgagtgatttcggccatttaccaagctactttgctgagcaagtg
tctaagttggttgccgagaaagggattcctaacttccaagcatggcaagatggcttgaaa
tacagcgaaggcgaaaaagcgttcgcaaccgaaaacacacgtgtgaacttctgggatgta
ctgtactggggcggctctgcttctgcgtacgaatgggctgagaaaggctacgatgtgatc
atctctaaccctgactacgtgtacatggatatgccttacgaagctgacccgaaagagcgt
ggctactactgggcaacgcgtgcaaccgacactcgtaagatgtttggttttgcaccagaa
aacttgccacaaaacgcagaaacctcactggatcgtgatggtaatggcttcagcggtaaa
ggcgaagtgaaaggtaagcctttctatggtctgtctgcgcagctgtggtctgaaaccgta
cgtactgatgagcagtatgaatacatggtattccctcgcgttctcgccgctgctgagcgc
gcatggcaccgtgcagagtgggaaaacgcctataaagttggcgtcgaatattcgcaagag
actcagttggttaaccataaagcgctgaacgcagattggaatcgctttgctaacgtatta
ggtcaacgtgagctggctaaacttgagaaagcaggcattgattaccgcctcccagttccg
ggagccaagatcgagaacggtcatttggccatgaacgttcagttcccaggtgtcacactg
caatactcactggatggtcaaacttggttggattatgacgcgaagcaagcgccaaaagtg
agcggagaagtttggattcgctcggtgtctgccagcggtgagcgcactagccgagtcact
tcactgaaataa
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