KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_16810
Entry
IR04_16810        CDS       T03827                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00061  Fatty acid biosynthesis
vcf00071  Fatty acid degradation
vcf01100  Metabolic pathways
vcf01212  Fatty acid metabolism
vcf02024  Quorum sensing
vcf04146  Peroxisome
Module
vcf_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    IR04_16810
   00071 Fatty acid degradation
    IR04_16810
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    IR04_16810
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IR04_16810
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vcf01004]
    IR04_16810
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcf04147]
    IR04_16810
Enzymes [BR:vcf01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     IR04_16810
Lipid biosynthesis proteins [BR:vcf01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   IR04_16810
Exosome [BR:vcf04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   IR04_16810
  Exosomal proteins of breast cancer cells
   IR04_16810
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: AKA00749
LinkDB
Position
I:2578205..2579890
AA seq 561 aa
MIQPNQFNHPPCALPPPNEMLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSA
LRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKIL
IVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFDEKLM
SIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSS
IIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIPFV
NSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYP
FRADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIG
SLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLPAPILLAVP
HNFPHFDRARYERTTQKVIARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVL
EKKYHDVGQNWPKGQLVVWEE
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgatccagcctaatcagttcaatcaccctccttgtgctctcccaccacccaatgagatg
ttgctgcgttgggctaaagagcgtccgaatgaggtgtacctaaaacagattattaaccgc
caatttgttgagtttacttacgccgaagttgcggataaggctctacgcctcgtttccgct
ttgcgagccttaggggctgatccgggcgataaagttgcattaatttcaaaaaactgtgcg
gaatggtttatttgcgatttagccatgatgctcggggattacatcagtgtgccgatcttc
ccgaccgcaggcagtgagactatcgattactgccttgagcacagtgaaagtaaaatcctg
atcgtcggcaagctggatgataataaagccactgcgcatgtgttagcagagcgtcctaat
cttatcagtatctcgcttccttatccttcggcagccaaatgccaatatgagtttcaaacg
ctgatcaaacagcatcaacccagtgaagagcgccccacccactttgatgaaaaactgatg
tccatcgtttatacctctggtacatcaggacaaccgaaaggtgccatgctcacttatggc
gcatttacttggtccgcccaacaactgatcaaccacataggtatcgaagaaaacgatcga
cttttctcatatctgccactcgctcatatcactgagcgagtttatatttttggttcatcg
atcatcggtggcgtactgaccgcatttccggaatctctcgatacctttatcgaagatgtc
aaaatgcaccgtccaaccctgttcatttctgtacctcgtttatggacactgttccaacaa
cgcatccaagataaactgccgcagaaaaagctgaatattctgctcaaaatccccttcgtc
aactcactcatcaaacgtaagttggccgatggtttagggctagatcaagctcgcgtgctc
ggttgtggctccgcaccagtctctcctgcattactcgaatggtatcgcagtgtcggacta
aacattaccgaagcgtggggcatgacggagtcctttgcatacagcacactcaactatcca
ttccgtgctgacaaaatcggtactgtgggtaatgcaggaccgggcattgaactgaaaatc
gcggaggatgaagaaatcttagtccgcagcaaaggcttgtttgctggctactataaaaat
gacaccgcgacagccgaaagctttaacgatgacggttggctacatactggcgatatcggg
tcattggatagtgaaggctatttaaccattcaaggtcgtaaaaaagacacctttaaaacc
gctaaaggcaagttcgtcgcccccgtacctatcgagaaaaagctgtttgaatacagccga
gttgagatgatgtgcttgatcggctctggtctcccagcccccattttgttagccgttccg
cacaatttccctcactttgatcgtgcgcgttatgaacgcaccacccaaaaagtgatagca
cgcatcaatagtgaattggaatctcacgaacaaattaaaggggtgttaatgattaaagat
ccttggagcattgataacggcatcttaacgccaacgctcaagatcaaacgtcatgttcta
gagaagaaatatcacgatgtcggccaaaactggcctaaaggtcagctcgtcgtttgggaa
gagtaa

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