Vibrio cholerae O1 El Tor FJ147: IR04_16820
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Entry
IR04_16820 CDS
T03827
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_16820
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IR04_16820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
Rad51
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
AAA
AAA_22
AAA_16
AAA_14
RecA
AAA_29
Zn_ribbon_Thio2
NTPase_1
AAA_24
DUF7125
AAA_5
Viral_helicase1
Zeta_toxin
Zn_ribbon_8
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AKA00751
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Position
I:complement(2582362..2583735)
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AA seq
457 aa
AA seq
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MKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAKV
QTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQM
PTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVMH
VADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSILL
DGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMVV
WEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNVV
GGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKHG
FKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDEL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctaagcgcgcctatgtatgtaatgaatgtggagcggattttccgcgttggcaa
ggacagtgtaatgcctgtggttcgtggaattcgatttcagaagttcgtttagcggcttca
ccgcaagtggcgcgcaatgaaaggttggtcggttatgcgggagcccttgaagcgaaagta
caaactttggctgatattgatttacaagaagtgcctcgattcaccagtggctttaaagaa
ctagatcgcgtactcggcggcggaattgtgccgggtgcggcgattttgattggtggtaat
ccgggcgcgggtaaatcgaccttactactgcaaaccatgtgtttactttccggacaaatg
ccgacgttgtacgtgacgggcgaagaatcgttgcagcaggtcgcgatgcgtgcttcacgg
cttggtttgccgaaacagcatctaaaaatgctctcagaaaccaatgtggatcggatttgc
cagattgctgagcaagaaaagccgcgcattatggtcatcgattcgatccaagtgatgcat
gtggcggatgtgcaatcgtcgccggggagtgtcgcgcaagtgcgtgaatcggccacggcg
cttacgcgttatgccaaacaaaataatgtggcggtatttattgtgggccacgtaaccaaa
gatggtacgttggcgggacctaaagttcttgaacacatcatcgattgctcgattctgctt
gatggtgatacagacagtcgttttcgtacacttcgtagtcataaaaaccgttttggtgcg
gtcaatgaactcggtgtgtttgcgatgactggacaagggatgcgtgaggtgagtaatcca
tcggcgattttcctttctcgtggagaagaagccacatctggtagctcagtgatggtggtg
tgggaaggaactcgcccactcttagtcgagattcaagctttggtcgattactcacaactc
gctaacccaagacgcgttgcggttggcttagaacaaaaccgtctctctttattactggcc
gtgctgcataaacacggtggtttgcaaatggctgatcaggatgtgtttgtgaacgtagtc
ggtggtgtgaaagtgacggagaccagtgcagatttagcgctactcatggcgttattgtcg
agttttcgtgatcgtccgctgccaaaagatgtcgtggtttttggtgaagtcggattggct
ggagaaattcgtcccgtaccgagtggtcaagagcgccttaacgaagccttcaaacatggt
tttaagaaagcgattgtgccgattgccaatatgccgaaaggtggtattgaaggtatgcag
atccacggtgtgaaaaagctttctgatgcgatcgcggcttttgatgagctgtaa
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