Vibrio cholerae O1 El Tor FJ147: IR04_16895
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Entry
IR04_16895 CDS
T03827
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IR04_16895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_16895
Enzymes [BR:
vcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
IR04_16895
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IR04_16895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AKA00766
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All DBs
Position
I:complement(2600542..2601402)
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AA seq
286 aa
AA seq
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MYEKLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKK
WGFGSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVS
EEACLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCL
DTCHTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGE
IGWECFEYIAQDARFNGIPLILETIDPDIWATEIATLRKFSTQKEN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaagttaatcggggcacatgtatcggcctctggtggtgtcgaactcgcgcca
gttcgagctcatgaaatcggagcgaatgcttttgctctcttcaccaaaaaccagcgccaa
tgggcagctaagccactggaagcgagcagcattcgtgctttcaaagccaattgtaaaaaa
tggggatttggcagtgaggcgattttgccgcacgactcttatctgattaatttaggggct
ccagaacccgagaagctcgacaaatcacgagccgcttttgtcgatgaaatgctgcgttgt
gatcagttagggttaactttgcttaactttcatcccggtagtcatttacagcaggtctct
gaagaggcgtgtttagcgacaattgctgagtcaattaatcttgcgcatcgtcaagtaccg
aatgtgattgcggtgattgaaaataccgcagggcaggggagtaacttaggttggcgtttt
gagcatctggcggcaatcattgaccaagttgaggataaagagcgggttggcgtatgccta
gatacttgccacacctttgccgcagggtatgatttgcgtacgaaagccgcgtgtgatgag
acattcgctgagtttgagcgagtggtcggtatgcactatttgcgcgcaatgcacatcaat
gattcaaaaggtaagctggctagccgcgttgaccgccatcattccttaggtatgggagag
attggctgggagtgttttgaatatatcgcgcaagatgctcgatttaacggtatccctctg
attttagaaacgattgatcctgacatttgggcgactgagatcgcaacgctacgcaaattt
tcgacgcaaaaagagaattaa
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