Vibrio cholerae O1 El Tor FJ147: IR04_17035
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Entry
IR04_17035 CDS
T03827
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00220
Arginine biosynthesis
vcf00240
Pyrimidine metabolism
vcf00250
Alanine, aspartate and glutamate metabolism
vcf01100
Metabolic pathways
vcf01110
Biosynthesis of secondary metabolites
vcf01240
Biosynthesis of cofactors
Module
vcf_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
IR04_17035 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
IR04_17035 (carB)
00220 Arginine biosynthesis
IR04_17035 (carB)
Enzymes [BR:
vcf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
IR04_17035 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
GSH-S_ATP
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AKA00794
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All DBs
Position
I:complement(2638657..2641887)
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AA seq
1076 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGG
IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDLDAPDA
LTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGG
FAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEFKSDT
AYMYSTYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKQRVVDLA
SKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNHEYTYIVNTASGRQ
AIEDSKVLRRGALAHKVNYTTTLNAAFATCMSHTADAKASVTSVQELHARVKANQA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagcatccttatccttggtgcgggtccaattgttatc
ggtcaggcttgtgagtttgactactcaggcgcgcaagcgtgtaaagccctgcgcgaagag
ggttaccgcgttattctggttaactcaaacccagcgaccatcatgactgacccagaaatg
gccgatgcgacttacatcgagcctatccactgggaagtggtgcgtaagatcatcgaaaaa
gagcgcccagatgcgattttgcccaccatgggcggccagactgcgctgaactgtgcgctg
gcactcgaaaaacatggcgtattggctgagtttggcgttgagatgatcggcgcaaccgcc
gatgcgattgataaagcggaagaccgctcacgctttgataaagcgatgaaatcaatcggc
ctagagtgtcctcgcgctgataccgcaaaaagcatggaagaagcgtacaaagtcctcgat
atggttggcttcccatgtatcatccgtccttctttcaccatgggcggcagcggtggtggt
atcgcttacaaccgtgaagagtttgaagaaatctgtactcgcggtctggatctttcaccg
accaatgaactgctgatcgatgaatcactgattggttggaaagagtacgagatggaagtg
gtgcgtgataagaacgataactgcatcatcgtctgtgcgattgaaaacttcgacccaatg
ggcatccacacgggtgactcgatcactgtcgctccagcgcaaacgctaactgacaaagaa
taccaaatcatgcgtaacgcctctttggcggtactgcgtgaaatcggcgtagaaaccggc
ggttcaaacgttcagtttggtatcaacccgaaagatggccgcatggtgatcatcgagatg
aatccacgtgtatcgcgctcttctgcgttggcttcaaaagccaccggtttcccaattgcg
aaagtggcggccaaactggcagtgggtttcactctggatgagttgatgaacgacatcaca
ggcggcgcaacaccagcctcgttcgaaccgaccatcgactacgtggtcactaagatccct
cgtttcaacttcgaaaaattcgccggtgccaatgaccgtctgactacacaaatgaagtca
gtaggtgaggtgatggcgattggtcgtaaccaacaagaatcactgcaaaaagcactgcgc
ggcttggaagtgggtgcggctggtctggatgagaaagtggatctggacgcgccagacgct
ctgaccaaaattcgttatgagctgaaagaagcaggcgcagagcgtatttggtacatcgcg
gatgcattccgtgccggtatgtcagtggatggggtatttaacctgaccaacatcgatcgc
tggttcctagtgcaaattgaagaactggtgaagctggaagccgaagtgaaagccggtggc
tttgcgggcttgaaccaagacgtactgcgtaagatgaagcgcaaaggcttctctgatgcg
cgtttgtcaaaactgctcggcgtgagcgaaaacgaaatccgtcgtctgcgtgaccaatac
aacatccacccagtttacaagcgtgtggatacctgcgcggcagaatttaagtcagatacg
gcttacatgtactccacgtatgatgaagagtgtgaagccaatccgactgacaaagacaag
atcatggtgctgggcggtggtccaaaccgtatcggtcaaggtatcgagtttgactactgc
tgtgtacacgccgcgcttgcactgcgtgaagatggttacgaaaccatcatggttaactgt
aacccagaaaccgtatcaaccgattacgacacctcagatcgcctctactttgagcctgta
actctagaggatgtgctggctatcgtgcgtgttgagaagccaaaaggcgtgatcgtgcag
tacggcggtcaaacaccactgaaactggcgcgagcgctggaagcggctggcgtacctgtg
attggtaccagcccagatgcgattgaccgcgctgaagaccgtgaacgtttccaacaagcg
gtacagcgtttaggcctcaaacagccagacaacgcaaccgtaaccgctatcgagcaagcg
attgagaagtcgcgtgaaatcggtttcccactcgtagttcgcccctcttatgttctgggt
ggccgtgcgatggagattgtgtacgatgagcaagatctgcgtcgttacttcaacgaagcg
gtgagcgtgtcgaatgaatcaccagttctgctggatcgcttccttgatgatgcaaccgaa
gtggacgtggatgcgatttgtgacggtgagcgcgtggtgattggcggcatcatggagcac
attgaacaagcgggtgttcactcaggtgactcagcctgttctctgccggcttacaccttg
agccaagaaatccaagacaagatgcgtgagcaagttgagaagttggcatttgaactcggt
gttcgtggcctgatgaacattcagtttgcagtcaaagacaacgaagtttacctgattgaa
gtaaacccacgtgctgcgcgtactgtgccgtttgtttctaaagcaaccggtgctccgctg
gcgaaaatcgcggcgcgcgtgatggttggacaaactctggagcaacaaggcttcaccaaa
gagatcattccaccttactactcagttaaagaagtggttctgccgttcaacaagttcccg
ggggttgacccactgcttggccctgaaatgcgctcaaccggtgaagtgatgggtgtgggt
gccacgtttgctgaagcctatgctaaagcagagttgggctgtggctcggtttaccctgaa
ggtggtcgtgcgctactttcggtgcgtgaaggtgacaaacagcgtgtagtggatctggct
tctaagctagtgaaactgggttaccagttggatgcgactcacggtactgcagtgattctg
ggcgaagcgggcatcaacccacgtctggttaacaaagtgcatgaaggtcgtccacacatt
ctggatcgcatcaaaaaccacgagtacacctacattgtgaacacggcttctggccgccaa
gcaattgaagactcaaaagtactgcgccgtggtgcattggctcacaaagtgaactacacc
accacactgaacgccgccttcgcaacttgtatgtcacacacggcggatgccaaagcatcc
gtcacttcagtacaagagctgcatgcgcgtgtaaaagcgaaccaagcttaa
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