Vibrio cholerae O1 El Tor FJ147: IR04_17200
Help
Entry
IR04_17200 CDS
T03827
Name
(GenBank) general secretion pathway protein GspE
KO
K02652
type IV pilus assembly protein PilB
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vcf02044
]
IR04_17200
02035 Bacterial motility proteins [BR:
vcf02035
]
IR04_17200
Secretion system [BR:
vcf02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
IR04_17200
Bacterial motility proteins [BR:
vcf02035
]
Pilus system
Pilus assembly proteins
IR04_17200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_16
AAA_22
PELOTA_1
PhoH
AAA_7
AAA_29
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKA00827
LinkDB
All DBs
Position
I:2682263..2683951
Genome browser
AA seq
562 aa
AA seq
DB search
MLTNLVAILRQAELISATQEQAVVTQVSASGTSVPEALLELSIFHAQELTEQLSHIFGLP
ETDLSRYDYANLCQQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQ
VELALADHRALQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQDDS
PVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKI
LSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLG
YNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLS
GINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHT
NSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNE
ILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQE
SGLEKLREGITSFAELQRVLYF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaaccttgttgctatcttgcgtcaggctgagttaatcagcgcaacgcaagaa
caagcggtggttacacaggttagcgcttcggggacttcggtgcccgaggcgctgcttgag
ttaagtatttttcacgcccaagaactgaccgaacaactgagccatattttcggcttgccg
gaaaccgaccttagccgctacgactacgccaacttgtgccaacagctcgggctgcgtgaa
ctgattacccgctacgatgccttgccgattgccaagcaaggcaatttattgctgcttgcg
gtctctgacccgaccttactgcaagccgaagaagaatttcgttttgccacaggattacaa
gttgaactggcactggccgatcaccgcgcgctgcaagccgcgattcgccgtttgtatggc
cgctcaattcaaggcgcagccaaccaagggaaagagatcagccaagatgagctcgccaat
ctggttaaagtcagtgacgacgagctgcaatccattgaagatctcagccaagatgactct
ccggttagccgctttatcaaccaagtgctgctcgatgcggtacgtaaaggtgcctcggat
attcattttgagccgtatgaaaaccagtatcggatccgcctgcgctgcgatggcatcttg
gtcgaaactcagcaaccggctagccatttaagccgccgtttagctgcgcggattaaaatt
ctctccaaattagatattgccgagcgccgcttgccgcaagacgggcggattaaactgcgc
ctaagccgcgataccgccattgatatgcgtgtttcgacacttcccactttatggggagaa
aaaatcgtgctgcgtctgctcgatagcagcgccgccaatctggatattgataagctcggc
tataacccgcagcaaaagcaactctacctcaacgccctgaaaagaccgcaaggaatgatt
ttaatgaccggccccaccggcagcggcaaaaccgtttcgctctatactgggctgcgcatt
ctcaacacgtcacagatcaatatctccaccgcggaagatccggtagaaattaacctctct
gggattaaccaagtgcaagtgcagccgaaaatcggctttggctttgccgaagcgctacgc
tcgtttctgcgccaagacccggatgtggtgatggtcggcgaaatccgcgatctggaaacc
gcagaaatcgcggtcaaagccgcgcaaaccggtcacttagtgctttccaccctgcacacc
aattcggccgctgaaaccgtaattcgtttagccaatatgggggtggagccgtttaacctc
gcgtcctcactcagtttaatcatcgcccaacgcctcgcgcgccgcctatgtaaacactgc
aaaatcgcggtgcgcccttctgccctattgcaaagccaatttgcatttcaacccaatgaa
atcttgtatgaagcgaatgcggcggggtgtaacgagtgtacgggcggctattcagggcgc
gttgggatctatgaagtgatggcgtttaataccgagctggcggaggccattatgcaacgc
gccagcattcatcaaattgaacgtttagccaaagccaatggcatgcaaacgttgcaagag
tccggtcttgaaaagctgcgcgaaggcatcaccagctttgccgagctgcagcgtgtgctc
tacttttaa
DBGET
integrated database retrieval system
