Vibrio cholerae O1 El Tor FJ147: IR04_17760
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Entry
IR04_17760 CDS
T03827
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcf03019
]
IR04_17760
Messenger RNA biogenesis [BR:
vcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IR04_17760
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
DUF7049
AAA_18
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AKA00927
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Position
I:2798760..2799620
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AA seq
286 aa
AA seq
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MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSVQGSQQNVAVSIDIRNL
PKEPSLVQDVLDQLKQNNDVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLAQAIEL
EKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGLPTDAD
YVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPMLEKNNR
SYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSLEKQQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatcgtggtcagcggacaatcgggagccggtaagagcgtcgctcttcgagta
ctcgaagaccttggttactactgtgtcgataacctgcccgtcagcctgctgacagccttt
atccagtcggttcaaggcagtcaacaaaacgtggcggttagcattgatatccgcaatctg
cccaaagagccaagcttggtacaagatgtactcgaccagctcaagcagaacaacgatgtc
agcatgctgtttctcgacgccagtaaagagaccttgctcaaacgctacagtgaaacacgg
cgcattcatcccctctctctcagtcaaagcaagccttcacttgcccaagccattgagtta
gaaaaacagctgcttggcccactcaaagagcaggcagacttgttgctcgacagcagtaac
cagtcgctgcatgagctgagcgaaacggtgcgtatgcgcattgaaggccgtgagcgcaaa
gaccttgtgatggtgtttcagtcgtttggctttaagtacggtttaccaaccgatgccgac
tacgtgtttgatgtgcgctttctccccaatccccattgggaacctgacctacgcccgctg
acaggactggatgctccgatcaaatctttcttggaaggtcatagcgaagtgatggaactc
aaacagcagatccaaaaattcttcgaatactggcttcccatgcttgagaaaaataatcgt
agctacctgaccatcgccattggttgtaccggaggcaagcaccgttcggtctacctgacg
cagcagttgggtgaatatttcgcgcaacttggtcatcaagtacagctccgccatacttca
ttggaaaaacagcaatcctag
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