Vibrio cholerae O1 El Tor FJ147: IR04_17895
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Entry
IR04_17895 CDS
T03827
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00230
Purine metabolism
vcf00240
Pyrimidine metabolism
vcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
IR04_17895 (cpdB)
00240 Pyrimidine metabolism
IR04_17895 (cpdB)
Enzymes [BR:
vcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
IR04_17895 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
IR04_17895 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AKA00954
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All DBs
Position
I:2828133..2830040
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AA seq
635 aa
AA seq
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MAGPVMADTIKLRIVETTDIHTNLMDYDYYKDKASDQIGLTRAATLVKQARAEVENSVLV
DNGDLIQGSPMGDYMAAKGIKAGEVHPVYKAMNPLGYDVGNIGNHEFNYGLEFLKETIND
AAFPYINANVFDAKTGQHLFTPYVIKEHSFKDTDGEAHTIKVGYIGFVPPQIMVWDKKNL
EGKVTAADIKQTAEKLIPEMKAKGADVIVAIPHSGISTDEYQAGAENSVYYLTQVKGIDA
IAFGHSHAVFPGKDFANVPGADIDKGTINGVTAVMPGRWGSHVGVMDLTLEKQQGRWAVT
SGQSEARPIFDKANKKALVEADATMVQALQHDHQGTCDFVNQPIGKANDVMYSFLSLVQD
DPTVQIVNLAQKDYVERFIQGDPNLDGLPVLSAAAPFKAGGRKDDPNGFTEVEAGELTFR
NAADLYLYPNTLVTMKVSGQQLKEWLECSAGQFNQIDVTSSAPQSLINWDGFRTYNFDVI
DGVNYQIDVTQPARYDGDCKLINPNSQRIVQLTYQGKPIDTQQTFLIATNNYRAYSNKFP
GTGAEFVAFDSPDENRTVVADYIARVSKDKGEVTPSADNNWSFAPISSKTKLDIRFETSP
SDKATQFIKQKGQYPMTRVASDDVGFAVYRIDLQK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccctgtaatggccgatacgatcaaactacgtattgttgaaaccacggatatt
cataccaatttgatggattatgactactacaaagataaagcctccgatcaaattggcctg
acgcgcgccgccacgcttgtcaaacaagctcgcgccgaagtcgaaaacagtgtgctggtc
gataacggtgatttgatccaaggtagcccgatgggtgactacatggcagcgaaaggcatc
aaggctggcgaagtgcaccccgtttataaagccatgaatccgctaggttatgatgtgggt
aacataggtaaccacgaatttaactacggccttgagtttttaaaagagaccatcaacgat
gccgccttcccctacatcaacgccaacgtgtttgatgccaaaacaggtcagcacttattc
acgccttatgtgattaaagagcacagctttaaagataccgatggagaggcacataccatc
aaggtcggttatatcggatttgttccgccacaaatcatggtgtgggataagaaaaatctc
gaaggtaaagtgaccgcagccgatatcaaacagaccgcagaaaaacttatccctgagatg
aaagccaaaggcgcggatgtgattgtcgccatcccccactctgggatcagcaccgatgaa
taccaagctggcgcagaaaactcggtttactacctgacccaagtcaaaggtattgacgcg
attgcttttggtcactctcacgccgtcttcccgggtaaagattttgctaatgtaccgggc
gcagacatcgataaaggtaccatcaatggcgtgaccgctgtgatgccggggcgttggggt
agccatgttggggtgatggatctgaccttagaaaagcagcaaggtcgctgggcagtgact
tccggtcaatccgaagctcgcccaatctttgacaaagccaataagaaagcgcttgtcgaa
gccgatgccactatggtgcaagcgctgcaacacgatcatcaaggtacatgcgactttgtt
aaccagccaatcggcaaagcgaacgacgtgatgtacagcttcttatcactggtgcaagat
gacccaacggtacaaatcgtcaacctcgcgcagaaagattatgtcgagcgctttattcaa
ggcgatccaaaccttgatggtttgccagtgctatctgccgctgcgcctttcaaagccggt
ggccgtaaagacgatcctaacggtttcactgaagtggaagcgggcgagctgactttccgt
aatgccgccgacctttacctgtacccgaacaccttagtcaccatgaaagtgagcggtcag
cagcttaaagagtggttagagtgctcagcaggccagtttaaccagattgatgtgacgtct
agcgcaccgcaatcgctcatcaactgggatggcttccgcacttacaactttgatgtgatt
gatggcgtcaattaccagatcgatgtgactcagcctgcgcgctacgatggtgactgcaaa
ctgatcaacccaaattcacagcgcatcgtgcaactgacttatcaaggtaagccaattgat
acccaacaaaccttcttgatcgccaccaacaactatcgtgcctacagcaacaaattcccc
ggcacaggcgctgagtttgtcgcgtttgattcccccgatgaaaaccgcacggtagtggcc
gattacatcgctcgcgtgagtaaggacaaaggcgaagtgacgccaagtgcggacaacaac
tggtcatttgctccgatcagcagcaaaaccaagctggatattcgctttgaaacctcacca
agcgataaagccacccagtttattaaacaaaaaggtcaatatccgatgacccgagtcgcc
agtgatgatgttggcttcgcagtgtatcgcatcgacttacaaaaataa
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