Vibrio cholerae O1 El Tor FJ147: IR04_18150
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Entry
IR04_18150 CDS
T03827
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02020
Two-component system
vcf02024
Quorum sensing
vcf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IR04_18150
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IR04_18150
05111 Biofilm formation - Vibrio cholerae
IR04_18150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcf03000
]
IR04_18150
Transcription factors [BR:
vcf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IR04_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
MarR_2
Exonuc_VII_L
HTH_24
HTH_23
MarR
Sigma70_r4
HTH_36
HTH_11
HTH_28
HTH_7
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AKA01003
LinkDB
All DBs
Position
I:2866872..2867504
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERTAWVRAKTPCEVAEISFKKFRQLIQVNPDILMRLSGQ
MARRLQVTSQKVGDLAFLDVTGRIAQTLLNLARQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttctaggtaaacctcaaaccgatccaacactagagtggtttctttcacattgtcac
attcataagtacccatcaaaaagcacactgatccacgcgggtgagaaagcggaaacgctg
tactacatcgtaaaaggttcagttgcggtactgatcaaagatgaagaaggtaaagagatg
attctctcttacctgaaccaaggtgattttatcggtgagcttggcttgtttgaagaaggc
caagagcgtacagcttgggttcgtgctaaaacaccttgtgaagtggctgaaatctcattt
aagaaattccgtcaattgatccaagtaaacccagatatcttgatgcgcctttcaggtcaa
atggctcgtcgtctgcaagtgaccagccagaaagttggcgaccttgcgttcctagacgta
actggccgtatcgcacagactctgctgaatcttgcacgtcagccagatgcgatgactcac
cctgacggtatgcaaatcaagatcactcgccaagagatcggtcaaattgttggctgttct
cgcgaaaccgttggccgcatcctgaagatgctggaagagcagaacctgatctctgcccac
ggtaaaaccatcgtggtttacggcactcgctaa
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