Vibrio cholerae O1 El Tor FJ147: IR04_18440
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Entry
IR04_18440 CDS
T03827
Name
(GenBank) transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcf03000
]
IR04_18440
Transcription factors [BR:
vcf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
IR04_18440
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AKA01060
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Position
I:complement(2928655..2929662)
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AA seq
335 aa
AA seq
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MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK
TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML
LLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIA
QISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAM
LMMLELLRGHDVRAGSRLLETKLVVRESAAPPSKK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatgaaggatgttgcccagcttgctggagtttcaaccgcgaccgtgtctcgt
gcgttgatgaatccagagaaagtctcgtcgtccactcgtaaacgagtggaagaggccgtg
ctggaagcgggttactcacccaattctttggcgcgcaatttgcgccgtaatgaatcgaaa
accatcgttgctatcgtgccagatatctgtgatccctacttttctgagatcattcgcggt
attgaagatgccgcgatggagcacggttatctggtgctgttgggggatagtggtcaacag
aagcgtcgggagaactcgttcgttaatctggtgtttaccaaacaggcagacggtatgttg
ctgctggggacagatttgccgtttgatgtgagtaaacctgagcagaaaaacctaccgcct
atggtgatggcgtgtgaatttgcgccagagctggaattgccaacggtacacattgataac
ctgacctcggcatttgaggcggtaaactatctcactcagcttgggcacaaacggattgcg
cagatctcaggtccacaacatgctgcgctgtgccaattccgtcatcaaggctatcaacag
gcgttgcgtcgtgctggcatcaccatgaacccgacttactgcacttttggcgatttcact
tttgaagccggggcaaaagcggtgcgtcagctgttggcattgcctgagcagccgaccgcg
attttctgtcataacgatacgatggcgattggcgcaattcaggaagcgaagcgacttggc
ttgcgcgtaccgcaagatctctctgtggtcggttttgacgatattcagtttgcccagtac
tgcgatcccccattaaccaccatttcgcagccgcgttatgagattggccgtcaagccatg
ctgatgatgcttgagctgcttcgcggacacgatgtacgtgctggatcgcgtcttttggag
accaagctggtcgtgcgtgagagtgctgcgccgccaagcaagaagtaa
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