Vibrio cholerae O1 El Tor FJ147: IR04_18445
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Entry
IR04_18445 CDS
T03827
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IR04_18445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_18445
Enzymes [BR:
vcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IR04_18445
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IR04_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
AAA_19
TrwB_AAD_bind
PIF1
AAA_22
AAA_16
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AKA01061
LinkDB
All DBs
Position
I:complement(2929968..2932172)
Genome browser
AA seq
734 aa
AA seq
DB search
MRPSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQ
LKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWR
LTALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEE
RKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLIT
PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI
VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP
ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGN
QVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGC
GSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGT
QMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH
HPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRET
LRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLAS
KVRWSIDIDPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccctccattgcccgagtttgcctacctgtacctctggataagtctttcgactat
ctgatcccagctcatctatttccagtgctgggcggtcgtgtgcaagtgccttttgggcga
caaaccttggtcggtattgtccagtcgctgacacatcaatccgattttcctatcgaacaa
ctgaaatccgtgcaagccgttttggatgacgcgcccgtgtggccagataaactgcagtct
ctgctgcactggtgtagccagttttatcattatccgctcggtgaaacgtacgcgaatgcc
ttgcccggcgcactgcgcaaaggcaaagcggcagagctgactagccataaagagtggcgt
ttgaccgcgcttggtcaagagcaactgatgcaaggggtgaagcgtggcgcggtaaaacaa
gcgcaagttctccatttgttgcagcacggcgctttatcgcaccaaactttgcttgatgaa
gaggtgagcagcacgaccctcaaagccttggtcgaaaaagggtggattgagtgtgaagag
cgtaaacctgtggcgcgtccttggccgcaagagctggaagctaaagtcgataaacctagg
cttaatcaagagcaggcgatcgcgattgcggcggtgaatagccagcaaggtttcggctgc
tttttattagaaggggtaacgggctcaggcaaaacagaggtgtatcttaacctcatcaca
ccggtattggcgcgtggtgaacaagccttggtgttggtgccggaaattggtttaacccca
caaaccatcaaccggtttcgccaacgttttaatgtccccgtcgaagtcatgcactcggcg
ctcaacgatactgaacgcctcaacgcttggctggcggcgcgcgataaagtggcggggatt
gtgattggtacgcgctcggcgctgctcacaccctttgccaaattgggcattattattgtt
gatgaagaacatgatagttcttacaagcagcaagatagcctgcgttatcacgcccgcgat
gtggctgtgatgcgcgcgcatctggagaatattccgattgtgcttggctcggcgacgcca
gccttggaaacgttgcataatgcgctcagtggtaaataccatcacttgcaactgacgcag
cgtgctggtaatgcactacccacacgtaaccacgcgttggatgtgaaagggctctatctg
gaaagtggtctgtctgcgcctttgattgcggaaatgcgccgccatttgtcggcgggcaat
caggtgatgctgtttttaaaccgccgcggtttttctccggccttgatgtgccatgaatgc
ggctggattgcggagtgccagcgctgtgatgcctattacacctaccatcaacacagcaat
gagatgcgctgccaccattgtggttcacagcgtcctgttctccatcaatgcaaagggtgc
ggctcgactcaactggttactgtcggcgttggtacggaacagcttgaagcgcaattacac
actctattccctgagtatcgttcagtgcggattgatcgagatagcacgcggcgtaaaggc
agtttggaatcggcgttaaccgcgattcgcaaaggcgaatatcagattttgattggtacg
caaatgctcgccaaaggacatcacttccccgatgttaccttggtcgcgttgttggatgtc
gatggctcattgtacagcagtgattttcgcgcttctgagcgtttggctcagctctttatt
caagtcgcagggcgggcagggcgtgccagcaagccgggcgaagtggtgctacaaacgcat
catcccgaacacagtttgctacaagccttgctgcataaggattaccaccattttgccctg
acggcgttggaagagcgtaagctggcgcagttgcccccttattctttcttgagcttattt
cgagctgaagccaatcacaccgctcaagtggaagattttttgcgtcaagtgcgcgaaacc
ttgcgctgcaatccttggtttgatagcgaatgtatggtgctcgggccaacgcctgcgcca
ctcgcgaaacgagcgggaaaattccgttggcagcttttactacaaacgccgaatcgcacc
ctgatgcagaagattttgcaaagcgcacgtccagcactgcaacaattaccgctggcgagc
aaggtgcgctggtcgatcgatattgatccgcaagatttgagctaa
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