Vibrio chagasii: L0991_01555
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Entry
L0991_01555 CDS
T11874
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vcg Vibrio chagasii
Pathway
vcg03030
DNA replication
vcg03430
Mismatch repair
vcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0991_01555 (dnaE)
03430 Mismatch repair
L0991_01555 (dnaE)
03440 Homologous recombination
L0991_01555 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcg03032
]
L0991_01555 (dnaE)
03400 DNA repair and recombination proteins [BR:
vcg03400
]
L0991_01555 (dnaE)
Enzymes [BR:
vcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0991_01555 (dnaE)
DNA replication proteins [BR:
vcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0991_01555 (dnaE)
DNA repair and recombination proteins [BR:
vcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0991_01555 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Imm64
Motif
Other DBs
NCBI-ProteinID:
XGB62771
LinkDB
All DBs
Position
1:341615..345094
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFVHLRVHSDFSMVDGLSKVPPLVKKVAEMGMPALALTDFTNLCGLVKFYGTAHGC
GVKPIIGADFLMQSPEFGDELTKLTVLASDNKGYNNLTLLISKAYLRGHIQHQPVIDKEW
LIENAEGLIILSGAKEGEIGKALLKGNRDLVASSVEFYKTHFPDRFYLELIRTGRADEES
YLHFALELAEQQDLPVVATNEVVFLTEDLFDAHEIRVAIHDGYTMVDPRRPKNYSAQQYL
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPNFPTEGLAIEDFLIKKSEEGL
ERRLAFLFPDEQVRAERRPEYDERLKVELEVINNMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALDITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFLAEPA
LPELYDGDEEVRELIDKCRILEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGNFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKEGKEPVRIESIPLDDQASFNLL
QNSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
VSYPDETWQHESLKDTLEPTYGIILYQEQVMQIAQILAGYTLGGADMLRRAMGKKKPEEM
AKQRGTFKEGAEANGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVIGLVDECFRMKLKLLPPDINSGLYRFNVDDDGAIVYGIGAIKG
VGEGPIEAIIEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILSGALDRLGPHRAAMMA
SLADAVKAASQYHHAESFGQSDMFGVLTDAPEEVEHKYTQVPRWPEKVWLEGERETLGLY
LTGHPVNAYIKELAKYTSCRLKDATPTRRDQSLTIAGLVIAARVMTTKRGTRIGLMTIDD
RSGRMEVMLFSDALDRYAELLEKDKIVVVSGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGVSISIDESQINGQFFERFSQILEPYRAGTVPVNVYYQRADARARLTLGTEWRVTPSDT
LLDELKQLLGNSQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccaaaatttgttcacctacgcgtacacagtgacttttctatggtggatggc
ctgtctaaggtgccaccattagttaaaaaagttgctgaaatgggtatgccagctttagca
cttaccgacttcactaacctatgtggtttggtgaaattttacggtactgcccatgggtgt
ggggttaaaccaattattggtgctgattttttgatgcaatctccagaatttggagatgag
ctgacgaaactgacggttttagcgtctgataacaaaggttataacaaccttaccttgctg
atttcaaaagcttacttgcgtggtcacatacagcatcaacctgtgatcgataaagagtgg
ttaatcgaaaacgctgaggggttgattatcttatctggcgccaaagaaggcgagatcggt
aaggcattgctgaaaggtaatcgtgatctcgtcgcgagtagtgtcgagttttacaaaact
cacttccccgatcgcttttacttagagctgattcgtaccgggcgtgccgatgaagagtct
tacctgcattttgcgttagagcttgctgagcaacaagacttacctgttgtggcaaccaac
gaagtggtgttcttaactgaagacttgtttgacgcccatgaaatccgcgtagcaatccat
gatggttacaccatggtcgatccgcgtcgtccaaaaaactacagtgcgcaacagtatctt
cgtagtgaagaagagatgtgtgagctgttttcagatatcccagaagcgcttgaaaacagc
gtagagattgctaagcgttgtaacgttactgttcgtcttggtgagtacttcctccctaac
ttcccgaccgaaggtttagcgatcgaagatttcttgattaagaaatcagaagaaggcctt
gaacgtcgtctagcattcttgttcccagatgagcaagttcgagccgagcgccgtcctgaa
tacgatgaacgtcttaaagtcgaactcgaagttatcaacaacatgggtttcccgggttac
ttcttgatcgtaatggaattcatccagtggtctaaagataacgatgtaccagtaggccct
ggtcgtggttcgggtgcaggttcattggtggcgtatgcattggatatcacggatctcgat
ccgctagaatacgatctactattcgaacgtttcttgaacccagaacgtgtctcgatgccc
gatttcgatatcgacttctgtatggataagcgtgaccaagtaattgatcacgttgcagaa
atgtatggtcgtgatgcggtatctcagatcatcacctttggtaccatggcggcaaaagcg
gtaattcgtgacgtaggccgtgtattgggtcacccgtttggcttcgtcgaccgtatttct
aagcttgtaccgccagatccgggtatgacacttgagaaagcctttcttgccgagcctgca
ttgccagagctttacgatggtgatgaagaggttcgcgaactgatcgataagtgtcgcatt
ctagaaggttgtacgcgaaacgccggtaaacacgcgggtggtgttgtaatctcaccaacc
acaattacagattttgcgcctatctatgcggatgcagaaggtaacttcccggtaacgcaa
ttcgataagaatgacgttgaaaccgctggtttggttaaattcgacttcttgggtctacgt
accctgaccatcatcgactgggcgttgggcctagtgaacccacgcttgaagaaagaaggt
aaagagccggttcgtattgaatcgatccctttggatgatcaagcgtcgttcaacctacta
caaaattctgaaaccactgcggtattccagctggaatcacgcggtatgaaagacttgatc
aaacgtcttcagcctgactgtttcgaagatatcatcgcattggtagccttgttccgtccg
ggtccgctgcaatcaggcatggtagataactttatcgaccgtaagcacggtcgagaagcg
gtctcttacccagatgaaacatggcaacatgaatcgctaaaagacacgttagaaccaacc
tatggcatcattctttaccaagagcaggtaatgcaaattgcacagatcctagcgggttat
acgctaggtggagcggatatgctgcgtcgtgcgatgggtaagaaaaagccagaagagatg
gctaaacagcgtggtaccttcaaagaaggtgcagaagccaacggtgttgatggcgagctg
gccatgaagatcttcgacttggtagaaaagtttgcgggctacggctttaacaaatcgcac
tcagctgcgtacgcattggtttcttaccaaacactctggctgaaaacacactatcctgca
gagtttatggccgcggtaatgacggcggatatggataacaccgagaaggttatcggcctt
gttgatgagtgtttccgtatgaagctcaaattgctgccgcctgatattaactctggtctc
taccgatttaatgttgatgacgacggtgcgatcgtttacggcatcggcgcgattaaaggg
gtaggtgaaggcccgattgaagcgatcattgaagcgcgaaataagggcggttacttcaaa
gatttattcgacttctgtgctcgtatcgatttaaagaaagttaacaagcgtgttatcgaa
aagttgattctatcgggtgcgttagatagattaggccctcaccgcgcagcgatgatggct
tcattggctgatgcggttaaagcagcaagccaatatcaccatgccgagtcctttggtcaa
tcggatatgtttggtgtattgacggatgctccggaagaagtcgagcacaagtacacccaa
gtaccaagatggccagaaaaggtttggctcgaaggtgaacgtgaaacgctaggtttgtac
ctgacgggtcacccggttaacgcttacatcaaagagttagcgaaatacaccagctgccgt
ttgaaagatgcgacgccaacacgccgtgaccaatcattaaccattgcaggtttggtgatt
gcagctcgagtaatgaccaccaagcgtggtactcgaattggtttgatgaccatcgacgat
cgatctgggcgtatggaagtgatgttgttctcagatgcgctcgatcgttacgcagaattg
ctcgaaaaagacaaaattgtggtcgtttctggacaggtcagctttgatgacttcaacggt
gggcttaaaatgtccgcgcgcgaggtcatggacttaggaagcgcccgtgaaaaatatgct
cgtggggtatcgatatctatcgatgaatcccaaattaatggtcaattttttgaacgattt
agtcaaatcttagaaccttatagagccggaacggtcccagtcaatgtatactaccagcgt
gccgacgctagagcgcggttaacattgggcacagaatggcgcgtgacgccaagtgataca
ttactagacgaattaaaacagctgcttggaaatagccaagtagaactcgaatttaactaa
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