Vibrio chagasii: L0991_09410
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Entry
L0991_09410 CDS
T11874
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vcg Vibrio chagasii
Pathway
vcg02020
Two-component system
vcg02040
Flagellar assembly
vcg05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L0991_09410
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
L0991_09410
09142 Cell motility
02040 Flagellar assembly
L0991_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcg03000
]
L0991_09410
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vcg02035
]
L0991_09410
Transcription factors [BR:
vcg03000
]
Prokaryotic type
Helix-turn-helix
Other families
L0991_09410
Bacterial motility proteins [BR:
vcg02035
]
Flagellar system
Flagellar assembly proteins
Others
L0991_09410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
bpMoxR
AAA
MCM
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XGB61656
LinkDB
All DBs
Position
1:complement(2100309..2101775)
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AA seq
488 aa
AA seq
DB search
MQGLAKLLVVDDNAQDRHNLSTILEFVGESCEVISSEQARKVDWSLQWAGCIIGSIKGKG
FNALLNDKLVHANHIPLLVIGKNNHPVDELTNFVGELELPLNYPQLSDALRHCKDFLGRK
GVQVVSSARKNTLFRSLVGQSAGIQEVRHLIEQVSSTEANVLILGESGTGKEVVARNIHY
HSKRRSGPFVPVNCGAIPPDLLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGD
MPMAMQVKLLRVLQERCFERVGGNCTIQANVRVIAATHRNLEDMIDDDSFREDLYYRLNV
FPIEMPALQERKEDIPLLLQELMTRMEAEGSLPICFTPRAINSLMEHDWPGNVRELANLV
ERMVILYPNSLVDVNHLPTKYRYSDIPEFQPEFNSFVSEEEQERDALADLFSEDFSFDQQ
DDMTDNANAPQELPPEGVNLKELLADMEVNMINQALEAQGGIVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaaactgcttgtcgtcgacgataacgctcaagatcgtcacaattta
agcacaatattagagtttgtaggagagagctgcgaagttatcagctctgaacaagcgcgc
aaagtcgactggtcactacagtgggctggttgcattatcggttcaataaaaggtaaaggc
ttcaacgcattactgaatgacaagcttgttcacgcgaatcacatccctctacttgtgatt
ggcaaaaacaaccatcctgttgatgagctcaccaattttgttggtgaactcgagctgccc
ctaaactaccctcagttaagtgacgcattaagacattgtaaagatttcctaggtcgcaaa
ggggttcaagtagtctcttctgcacgcaagaacacactgtttcgtagcctagtgggtcaa
agtgctggtattcaagaagttcgtcacctaattgaacaagtctcctctactgaagcgaat
gtactgattcttggtgaatccggtaccggcaaagaggtggttgcacgtaacattcattac
cattcaaagcgccgctctggtccgtttgtgccagttaactgtggtgcaatcccgccagac
ttattggaaagtgagcttttcggtcatgagaagggcgcatttactggcgcgattaccgca
cgtaaaggacgctttgagttagctgaaggtggcacgctatttcttgatgaaattggcgac
atgccaatggctatgcaagttaagctgttgcgtgtactacaagagcgatgctttgaacgc
gtaggtggcaattgcactattcaggctaacgttcgcgtgattgcggctacacaccgtaac
cttgaagatatgatcgacgatgattcattccgtgaagatctttattaccgcttgaatgtg
ttcccgattgaaatgccggccttacaagagcgtaaagaagatattcctcttcttcttcag
gagcttatgacgagaatggaagcggaaggtagtctgcctatctgctttacgcctcgcgcg
attaactctttgatggagcacgactggccaggtaacgtacgtgaattggcgaatttagtg
gagcgcatggttattctctatccgaatagcctagtggatgtaaaccacctgccaactaag
tatcgatacagtgatatccctgaattccaaccagagtttaatagctttgtgtctgaggaa
gagcaagagcgtgacgcgttagccgatctattctcggaagatttcagtttcgatcagcaa
gatgatatgactgacaacgcgaatgcacctcaggaactaccaccagaaggtgtgaacctg
aaagagctactcgctgatatggaagtgaatatgatcaatcaagccttggaggcgcagggt
ggtattgttgctcgagcggcagacatgttaggtatgcgcagaaccactctggttgagaaa
atgcgtaaatacaatctgcagcgttag
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