Vibrio chagasii: L0991_11650
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Entry
L0991_11650 CDS
T11874
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vcg Vibrio chagasii
Brite
KEGG Orthology (KO) [BR:
vcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcg03021
]
L0991_11650 (rapA)
Transcription machinery [BR:
vcg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
L0991_11650 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Apolipoprotein
AAA_34
NAT10_TcmA_helicase
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
XGB62057
LinkDB
All DBs
Position
1:complement(2598475..2601384)
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARTDAPVTRVTFNVGDV
IECQEGWSLSVEEVIEDKGLLTYLGTREDTQESEVTLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALSNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
ESDNPFDTQQYVLCSLDFLRKSRKRYEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAENTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEDQYAPVADAVTALF
SGVKLEDSAKNQITELLSEQDVEPLFRVIEGDSSEEEQALARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPKRNVNLLPMDIPTQYTTSMRVSGMIGGKMAPEARAMKMLYPEEIFQEFE
GEDSSWWQFDSRVNWLIEKIQDKRSEKILVIASRASTALQLEQALREREGVRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQQRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRTVYDKYSDELIEMLASGN
TEQLDEVIEESAKLNQSLKADLEKGRDRLLEMHSNGGDKAHEIAEKIASTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMNFISW
EHPMIQGGIDLLLSEGVGTSAVSLLKNKALPVGTILLELVYLVDAQAPKRSGISQFLPKT
PIRLMMDGRGNDLSAQVEFDSFNRQLSPVNRHLASKLVNSVQGEIHKLIEAGEAQVLPKV
EEVRQQAQRDMQTNLNGELERLQALKAVNPNIRDEELEVIEAQINELTGYISKAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcaacgctggataagcgatacggagagcgatttaggtttaggt
accgttgtagcaatggatgctcgcacagtgacactaatgtttgcagcatcagaagaaaac
cgtgtgtatgcacgtacggatgctcccgtaacccgagtaacgtttaatgtaggcgatgtc
atcgaatgccaagaaggttggtctctgtctgtcgaagaagtaatcgaagataaagggcta
ctgacctacctaggtacacgtgaagatacccaagaatcagaagtgactctgcgtgaaatc
ttcttaagcaatcagatccgttttaacaagccacaagacaaactgtacgcaggtcaaatc
gaccgtatggataattttgtgttgcgttaccgtgcactaagcaatcaataccaacagcac
aagagcccaatgcgtggcttgtgtggtatgcgtgctggtctaattcctcaccagttgtac
atcgctcatgaagtgggtcgtcgtcatgcgccacgtgttttattagctgatgaagttggt
ctaggtaaaaccatcgaagcgggtatgatcatccaccaacaggtgttgtctggtcgtgcg
gaacgcatcctgatcgtggtacctgaaacactacaacatcaatggttagttgagatgatg
cgtcgtttcaatctgcacttttctatctttgatgaagagcgttgtattgaagcctttgca
gaatcagataacccatttgatacccaacaatacgttctgtgttcgttagatttcttacgc
aagagccgcaagcgctacgagcaagcgcttgaaggtgagtgggatctgttggttgtcgat
gaagcgcaccaccttgagtggagccaagacaaaccaagccgtgaataccaagtggtagag
ggcttggcagaaaatactcctggtgtgcttttgctgactgctactccagagcaactgggc
cgtgagagtcactttgcacgtctgcgtctattggatcctgaccgcttctacgattacgaa
gcgttcgttgaagaagaagatcaatacgcaccggttgctgatgctgttaccgcactattc
tcaggcgtgaaacttgaagacagcgcgaagaatcagattacagagctgctttctgagcaa
gatgttgagcctctattccgcgttatcgaaggtgatagcagcgaagaagagcaagcatta
gctcgtcaagaactgattgataaccttatggatcgccatggtactggtcgtgttctattt
agaaatacacgtgccgctatcaaaggcttccctaagcgtaacgtcaacctactgccgatg
gatattccaacgcagtacaccacgtcgatgcgcgtatcaggcatgatcggtggcaagatg
gcaccagaagctcgtgcgatgaagatgctttacccagaagagatcttccaagagtttgaa
ggtgaagactcaagctggtggcagttcgattcacgtgttaactggctgattgaaaagatc
caagacaagcgtagcgaaaagatcctagtgatcgcatcacgtgcaagtacggcacttcaa
ttagagcaggcactgcgtgagcgtgaaggtgtacgtgcaactgtattccacgaaggcatg
tcgattctagagcgtgataaagcagcggcttattttgctcaagaagagggcggtgctcag
gttcttatctgtagtgaaatcggctctgaaggccgtaacttccagtttgctaaccaatta
gtgatgtttgaccttccattcaacccagacttgctcgagcaacgtattggtcgtttggat
cgtattggccaacagcgtgatatcgatattcatgttccttatctgaaaggcacatcacag
gcgatcctagcgcgttggtttgatgaaggcctgaatgcattcgcggaaacgtgcccaact
ggtcgcacggtttacgacaagtactcagacgagcttattgaaatgctggcttctggtaac
acagaacagcttgatgaagtgatcgaagaatcagctaaactaaatcaaagcctaaaagcg
gatctagaaaaaggccgagatcgcctactagagatgcactcaaacggcggtgataaagca
cacgagattgcagagaagatcgcatcaaccgatggcgacactaacctagtcacttttgcg
ttgagcttgttcgacaccattggtttgaaccaagacgacaaaggtgaaaatgcgctagta
gttacgccatctgagcacatgatggtaccaagctaccctggcttaccttatgaaggtgca
actatcacgttcgaccgtgatactgcactttctcgtgaagacatgaacttcattagctgg
gaacacccaatgattcagggtggtattgatttactacttagcgaaggggtgggtacttct
gcagtatcactacttaagaacaaagcgctgccggttggcactatcttgcttgaattagtt
tacttggtggatgcacaagcaccaaaacgcagtggtatcagccagttcctgcctaagact
ccgattcgtttgatgatggatggccgtggtaacgacctatctgctcaggttgaatttgat
agctttaaccgccagctaagcccggtgaaccgtcacctagcaagtaagttagttaactcg
gtacaaggcgaaattcacaagctaatcgaagcgggtgaggcacaagttcttcctaaagtg
gaagaagtgcgtcagcaagcgcaaagagatatgcagacaaacctgaacggtgaactagag
cgtctgcaagcactgaaagcggtgaacccaaatattcgtgatgaagagctagaagtgatc
gaagctcagattaacgaactgacaggctacatcagcaaagctcaggttcaactagactcg
ctacgcttgattgtggtttctcacaattaa
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