Vibrio cholerae O1 El Tor N16961: VC_0004
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Entry
VC_0004 CDS
T00034
Name
(GenBank) inner membrane protein, 60 kDa
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch02024
Quorum sensing
vch03060
Protein export
vch03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VC_0004
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VC_0004
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VC_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vch03029
]
VC_0004
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vch02044
]
VC_0004
Mitochondrial biogenesis [BR:
vch03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
VC_0004
Secretion system [BR:
vch02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VC_0004
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
DUF2427
Motif
Other DBs
NCBI-ProteinID:
AAF93182
UniProt:
Q9KVY4
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All DBs
Position
I:complement(2271..3896)
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AA seq
541 aa
AA seq
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MDSQRNILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQNV
AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQGHQFIAQSGL
VGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRGSYAVDV
VFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMKDRN
LSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGDMGIRTPNKTIANGDKAE
FEATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLT
FIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGG
CLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYILPLLMGASMFVIQKMS
PTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKALEKKGLHS
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaacgtaatatcttgttaatcgctctggcgctggtttctttcctactgttt
caacaatggcaagtagcgaagaaccctgcaccgcaagcgacacagcaggcccaatccaca
ggcgcagctcctgctccttcattttccgatgagttagatccaacgcctgcacaaaatgtg
gcggcgaaggccaagaccattaccgtctcaaccgatgtactgactctgtctattgatacg
ctcggcggcgatgtggttagcgcaaaactgaatcaatactcagaagagctcaattcgcct
gagtcttttgtcttgttgcaaaacacccaaggccatcagtttattgctcaaagtggttta
gtcggcccacaaggcattgacgtcaccagcaataatcgtcccgcttaccaagtgagtgcg
gatagtttcactctggccgaaggccaagatgaactgcgcattcctatgacctatcaagcc
aatggcattgactacacgaaaaccttcattcttaagcgtggtagctacgccgtggatgtg
gtgtttgacgtcgccaataattcaggtagcgaagccacactaggtatgtatgctcacctg
cgccaaaatctgctggattctggtggcaacctcgccatgccaacttaccgtggtggtgct
tactcaaccagcgatgtgcgttacaagaagtacagcttcgacgacatgaaagatcgcaac
ctcagtgcaccaaacgatgtgacggtaaactgggtcgcgatgatccagcactacttcgct
tcagcatggatcccacgtgatgagccgcaagcacagctttactcacgcgttatcaataat
ttaggtgatatgggtatccgtacaccaaacaaaaccattgccaacggtgataaagcagag
tttgaagcaaccttatgggtaggcccaaaactgcaagaccaaatggccgcaacagcccct
aatcttgatctggtggttgattatggttggttgtggttcattgctaagccactgcactgg
ttgctgtctgtgattcagacctttgttggcaactggggtgtggccatcatctgcttaacc
tttattgttcgtggtgcgatgtacccactgaccaaagcacagtacacctcaatggcgaaa
atgcgcatgctgcaacctaaactgcaagcgatgcgtgagcggattggcgatgatcgccag
cgcatgagccaagagatgatggagctgtataagaaagagaaagtaaacccactgggtggc
tgtctccctatccttctgcaaatgccgattttcattgcgctgtactgggcactgatggag
tcggtagagctgcgtcactctccattctttggttggattcatgacttgtccgcgcaagat
ccttactacatcttgccactgctgatgggtgcgagcatgttcgttatccagaagatgagc
ccgaccacgatcaccgatccaatgcaacagaagatcatgaccttcatgccagtcatgttc
actttcttcttcctgtggttcccatcaggtctggttctgtactggttggtgtcgaacatc
gtaacgctaatccagcaaacgctgatctacaaagcgctagagaaaaaaggcttacactcc
aagtaa
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