KEGG   Vibrio cholerae O1 El Tor N16961: VC_0004
Entry
VC_0004           CDS       T00034                                 
Name
(GenBank) inner membrane protein, 60 kDa
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_0004
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_0004
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_0004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:vch03029]
    VC_0004
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_0004
Mitochondrial biogenesis [BR:vch03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    VC_0004
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_0004
SSDB
Motif
Pfam: YidC_periplas 60KD_IMP DUF2427
Other DBs
NCBI-ProteinID: AAF93182
UniProt: Q9KVY4
LinkDB
Position
I:complement(2271..3896)
AA seq 541 aa
MDSQRNILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQNV
AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQGHQFIAQSGL
VGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRGSYAVDV
VFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMKDRN
LSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGDMGIRTPNKTIANGDKAE
FEATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLT
FIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGG
CLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYILPLLMGASMFVIQKMS
PTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKALEKKGLHS
K
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggattctcaacgtaatatcttgttaatcgctctggcgctggtttctttcctactgttt
caacaatggcaagtagcgaagaaccctgcaccgcaagcgacacagcaggcccaatccaca
ggcgcagctcctgctccttcattttccgatgagttagatccaacgcctgcacaaaatgtg
gcggcgaaggccaagaccattaccgtctcaaccgatgtactgactctgtctattgatacg
ctcggcggcgatgtggttagcgcaaaactgaatcaatactcagaagagctcaattcgcct
gagtcttttgtcttgttgcaaaacacccaaggccatcagtttattgctcaaagtggttta
gtcggcccacaaggcattgacgtcaccagcaataatcgtcccgcttaccaagtgagtgcg
gatagtttcactctggccgaaggccaagatgaactgcgcattcctatgacctatcaagcc
aatggcattgactacacgaaaaccttcattcttaagcgtggtagctacgccgtggatgtg
gtgtttgacgtcgccaataattcaggtagcgaagccacactaggtatgtatgctcacctg
cgccaaaatctgctggattctggtggcaacctcgccatgccaacttaccgtggtggtgct
tactcaaccagcgatgtgcgttacaagaagtacagcttcgacgacatgaaagatcgcaac
ctcagtgcaccaaacgatgtgacggtaaactgggtcgcgatgatccagcactacttcgct
tcagcatggatcccacgtgatgagccgcaagcacagctttactcacgcgttatcaataat
ttaggtgatatgggtatccgtacaccaaacaaaaccattgccaacggtgataaagcagag
tttgaagcaaccttatgggtaggcccaaaactgcaagaccaaatggccgcaacagcccct
aatcttgatctggtggttgattatggttggttgtggttcattgctaagccactgcactgg
ttgctgtctgtgattcagacctttgttggcaactggggtgtggccatcatctgcttaacc
tttattgttcgtggtgcgatgtacccactgaccaaagcacagtacacctcaatggcgaaa
atgcgcatgctgcaacctaaactgcaagcgatgcgtgagcggattggcgatgatcgccag
cgcatgagccaagagatgatggagctgtataagaaagagaaagtaaacccactgggtggc
tgtctccctatccttctgcaaatgccgattttcattgcgctgtactgggcactgatggag
tcggtagagctgcgtcactctccattctttggttggattcatgacttgtccgcgcaagat
ccttactacatcttgccactgctgatgggtgcgagcatgttcgttatccagaagatgagc
ccgaccacgatcaccgatccaatgcaacagaagatcatgaccttcatgccagtcatgttc
actttcttcttcctgtggttcccatcaggtctggttctgtactggttggtgtcgaacatc
gtaacgctaatccagcaaacgctgatctacaaagcgctagagaaaaaaggcttacactcc
aagtaa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0147
Entry
VC_0147           CDS       T00034                                 
Name
(GenBank) cell division protein FtsY
  KO
K03110  fused signal recognition particle receptor
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_0147
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_0147
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_0147
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_0147
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_0147
SSDB
Motif
Pfam: SRP54 SRP54_N Zeta_toxin AAA_22 AAA_33 AAA_30 AAA_17 AAA_24 MeaB ABC_tran APS_kinase CbiA AAA nSTAND3 AAA_31 AAA_16 TrwB_AAD_bind YqeC Thymidylate_kin SLFN-g3_helicase Fe-ADH AAA_19 VirC1 NTPase_1 PIF1 MMR_HSR1 Rad17 MobB ATP_bind_1 AAA_5 AAA_7 AAA_14 KTI12 Trypan_PARP HerA_C
Other DBs
NCBI-ProteinID: AAF93324
UniProt: Q9KVJ6
LinkDB
Position
I:136954..138129
AA seq 391 aa
MTEKKKRGLLSWLGFGDEEKSQTTATDTQTQDEPQSQADVEAVAIQTETALTETETETET
ETETETETETATVEPARIVEQEKPTESFFARLKRSLSRTKANIGAGFFGLFKGKKIDDDL
FEELEEQLLIADVGMDTTSKIIANLTARASRQQLRDGEALYGLLKEEMAEILSQVEQPLV
IDTEKKPYVILMVGVNGVGKTTTIGKLAKQFQAQGKKVMLAAGDTFRAAAVEQLQVWGER
NQVPVIAQHTGADSASVIYDAIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKK
IDDSAPHEIMLTLDAGTGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQI
PIRYIGVGEKIDDLRPFATQEFIDALFSREE
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgacggaaaaaaagaagcgtggcttgttgtcatggcttggatttggtgacgaagagaaa
agccaaaccactgcaacggatactcaaacgcaggatgaaccacaaagccaagccgatgtt
gaagcggtggcgattcaaacggaaactgcgttaacagaaacagaaacagaaacagaaaca
gaaacagaaacagaaacagaaacagaaacagccacggttgaacctgcacgtattgttgaa
caagagaaaccgaccgaaagtttctttgcgcgcttaaagcgcagtttgagccgcaccaaa
gcgaatattggcgctggcttctttggcctgtttaaaggcaaaaagattgatgatgacctg
ttcgaagagctcgaagaacaactgctgattgccgatgtcggcatggatacgaccagcaaa
atcatcgctaatttgaccgccagagcttctcgccagcaactgcgtgatggggaagcgctg
tacggtctgctgaaagaagagatggccgagattctctctcaggtcgagcagccattggtg
atcgacactgagaaaaaaccttacgtgatcttgatggtgggcgtgaatggggtgggtaaa
actaccacgatcggtaaactggctaaacagttccaagcgcaaggcaagaaagtgatgttg
gcagcgggcgataccttccgtgctgcagcggttgagcagttgcaagtgtggggagagcgc
aatcaagtgcctgtcatcgctcagcatactggcgccgacagtgcctccgtcatttatgat
gcgattgaagcggcgaaagcgcgcgggattgacgtggtgattgcggataccgcaggccgt
ctgcaaaacaaaagtaacctgatggaagagctgcgcaagattgtgcgcgtgatgaagaag
attgatgacagtgcgccacatgaaatcatgttgacgctggatgcgggtaccggacaaaac
gcgatcagtcaggccaaattgtttagtgatgtagcgcccatcacgggcattaccttaact
aagcttgatggcaccgctaaaggtggcgtgattttcgcgattgccgatcaattccagatc
ccaatccgttatatcggtgtcggcgagaaaattgacgacttacgtccatttgcaacacaa
gagtttatcgacgcgctatttagccgcgaagaataa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0322
Entry
VC_0322           CDS       T00034                                 
Name
(GenBank) preprotein translocase, SecE subunit
  KO
K03073  preprotein translocase subunit SecE
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_0322
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_0322
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_0322
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_0322
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_0322
SSDB
Motif
Pfam: SecE
Other DBs
NCBI-ProteinID: AAF93495
UniProt: Q9KV36
LinkDB
Position
I:336719..337114
AA seq 131 aa
MTGWFMKANNAEAPDSSNAADTLKWVATFVLLVAAVVGNYLYGELSVVARAAGVIVLIAA
ALGVAATTTKGKEAIVFARESRMEVRKVVWPTRQETMQTTLIVLAVSIVMALALWGIDGI
MVRLVAFATGV
NT seq 396 nt   +upstreamnt  +downstreamnt
gtgacaggttggtttatgaaagcaaacaacgctgaagctcctgatagctcaaatgcagca
gacactctaaagtgggtagccacttttgttctgctggttgccgctgttgtgggtaattac
ctgtatggtgaactgtctgtggtggctcgcgccgcaggtgtaattgtgttgattgctgca
gcacttggtgttgctgcgacaacaacaaaaggcaaagaagcgatcgtttttgctcgcgaa
tctcgcatggaagttcgcaaagtagtttggccaacacgccaagaaactatgcaaaccacg
ctgatcgttttagcagtaagtattgtaatggctctggcgctttggggtattgacggcatt
atggttcgtctagtggcctttgcgaccggagtatag

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0560
Entry
VC_0560           CDS       T00034                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_0560
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_0560
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_0560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_0560
Enzymes [BR:vch01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     VC_0560
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_0560
  Eukaryotic Sec-SRP protein
   VC_0560
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin cobW AAA_30 KTI12 AAA_31 AAA_24 AAA_33 AAA_19 Mg_chelatase Helicase_RecD T2SSE AAA_18 GlnD_UR_UTase APS_kinase AAA_16 AAA_14 ATP_bind_1 YqeC KAP_NTPase DUF3867 Rad17 TsaE Thymidylate_kin
Other DBs
NCBI-ProteinID: AAF93728
UniProt: Q9KUG1
LinkDB
Position
I:594665..596050
AA seq 461 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV
GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK
KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL
PADMKDKVDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQQGGMKGMMRNMQGLMGGGGRGGFGGGFFGR
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaaccgatcgattgtccaaaacgctgaaaaatatcagcggcaaaggt
cgtcttactgaagacaacattaaagataccctgcgcgaagtgcgcatggcgctgttagag
gcggacgttgcgctgcctgtcgttcgtgatttcgtcaatcgcgttaaagaaggcgcggtg
ggggtcgaggtttccaaatctctgactccgggtcaagagttcatcaaaatcgtccgccag
caacttgaagctgtgatgggcgaatccaacgaagcgttgaatcttgccgctcagcctcca
gcggttattttgatggctggtttgcaaggtgcgggtaaaaccacatccgtaggcaaactc
tctaagctcctaaaagagcgtgataagaagaaagtgttggtggtttccgccgacgtgtat
cgcccagcggcgatcaagcagctcgaaacattagccaatgatttaggcgttgatttcttc
ccgtccacaccggatcaaaaaccgattgatatcgctaacgctgcaattgatcacgctaag
aagaaattctacgacgtactgattgtcgataccgcaggtcgtttggcgattgatgagcag
atgatggcggagatccaagcgctgcataaagcgatcaatccggttgaaaccctgttcgtg
gtcgatgccatgacgggtcaagatgccgccgataccgcgaaagcgtttggtgatgcattg
ccactgaccggggtgattctaaccaaggtcgatggtgatgcccgtggcggtgcggcgttg
tcggtacgccatattaccggtaaaccgattaaatttatcggtgtcggcgagaaaaccgat
gccttagagcctttccatccggatcgtattgcttcacgcattcttggtatgggcgatgta
ctgtcgctgatcgaagatctgcagcgcaatgttgaccaagagaaagccgaaaaactcgcg
aaaaaattcaaagagaagaaaggctttgatttagaagactttcgtgagcagttaggtcag
atgaaaaacatgggcggcatgatggggatgctcgataaactgcccggaatgtctcaactg
cctgcggatatgaaagacaaagtggatgatcgcgttttcaaacagatggaagccatcatc
aactcaatgaccatgaaagagcgtcaaaacccagacctcatcaaaggctcacgcaaaaag
cggattgctgcgggttccggtacccaagtgcaagacgtaaaccgcctgctcaagcaattt
acccagatgcagaagatgatgaagaaaatgcaacaaggtggcatgaaaggcatgatgcgt
aacatgcaaggcctgatgggcggcggtggccgtggtggtttcggcggcggtttcttcggt
cgttaa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0640
Entry
VC_0640           CDS       T00034                                 
Name
(GenBank) preprotein translocase, SecG subunit
  KO
K03075  preprotein translocase subunit SecG
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_0640
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_0640
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_0640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_0640
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_0640
SSDB
Motif
Pfam: SecG
Other DBs
NCBI-ProteinID: AAF93806
UniProt: Q9KU83
LinkDB
Position
I:682585..682920
AA seq 111 aa
MFTVLLVIYLLAAVAIIGLVLIQQGKGADMGASFGAGASNTVFGASGSGNFLTRMTAIFA
TVFFVISLVLGNMSTHKTESQWVDPSQGQVIQQAGDSVSEAPAKSSDEIPQ
NT seq 336 nt   +upstreamnt  +downstreamnt
atgtttacagttctacttgtgatttacctgttggcagcggttgctatcattggcctagtg
ttgattcaacaaggtaaaggcgcagacatgggagcctcattcggtgctggcgcgtcaaac
acagtgtttggtgctagcggctcaggtaacttcctaacccgaatgactgcgattttcgca
acagtattttttgttatcagtcttgtgcttggcaatatgtcaactcacaaaactgaatca
caatgggttgacccttcacaaggtcaagtgattcagcaagctggtgactcagtgagtgaa
gcgcctgctaaaagtagtgacgaaattcctcaataa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0742
Entry
VC_0742           CDS       T00034                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03210  preprotein translocase subunit YajC
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_0742
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_0742
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_0742
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_0742
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_0742
SSDB
Motif
Pfam: YajC MlaD MreC Orf78 Myosin_N DUF2615
Other DBs
NCBI-ProteinID: AAF93907
UniProt: Q9KTY8
LinkDB
Position
I:795485..795817
AA seq 110 aa
MSLISVAHAAGEGAPQGGGFEMIIMLAMFAVIFYFMIYRPQAKRVKEHKNLMAAMAKGDE
VLTSGGLVGRITKIAEDNAYITIELNTNNEVVIKKDFVTAVLPKGTLKSL
NT seq 333 nt   +upstreamnt  +downstreamnt
atgagtttaatttctgtagcacatgccgcaggcgaaggtgccccacaaggtggcggtttt
gaaatgatcatcatgctcgcgatgttcgcagtgatcttctatttcatgatctaccgtcca
caagctaagcgtgtcaaagaacacaaaaacctgatggctgcgatggcaaaaggtgacgaa
gtgttgacctctggtggtctagtgggtcgtatcactaagattgctgaagataacgcttac
atcacaatcgagttgaacaccaacaacgaagttgtgatcaagaaggacttcgtgactgca
gtgctaccaaaaggtacgctgaaatctctttaa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_2394
Entry
VC_2394           CDS       T00034                                 
Name
(GenBank) preprotein translocase, SecA subunit
  KO
K03070  preprotein translocase subunit SecA [EC:7.4.2.8]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_2394
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_2394
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_2394
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_2394
Enzymes [BR:vch01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     VC_2394
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_2394
SSDB
Motif
Pfam: SecA_DEAD P-loop_SecA SecA_SW SecA_PP_bind SEC-C DEAD Helicase_C
Other DBs
NCBI-ProteinID: AAF95537
UniProt: Q9KPH4
LinkDB
Position
I:complement(2560390..2563101)
AA seq 903 aa
MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL
DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA
LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN
EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN
KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS
PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA
KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV
RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL
NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKA
EWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFT
SDRMAALIQSGMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVY
ELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLPI
QSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHLA
AMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVERM
EAQRRAQAEEAARHAQAQHASADDAEQDESNQPMVRDERKVGRNEPCPCGSGKKYKQCHG
QIN
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgataactaagctactgacaaaggtgattggcagtcgcaatgaccgcacactgcgccgt
ttacgcaagattgtaaaagagattaataactacgaacccgcctttgaagccctctccgat
gaagagctaaaagcgaaaactgtcgagttccgtcaacgcattgaacagggcgaaaacctt
gatcaactgttgccagaagcttttgccaccgtgcgcgaagcttctaagcgtgtgttcggc
atgcgccattttgatgtacagctgattggcggtatggtgctgcatggcggtcaaatcgct
gagatgcgtacgggtgaaggtaaaacgctaaccgcaacgctggctgcttacctgaatgcc
ctacctggcaaaggcgtacacattgttacggtcaacgactacttggccaaacgtgacgca
gaaaccaaccgaccactcttcgaattcttaggcatgaccgtgggtgtgaatattcccaac
atgccgcagcctgctaaaaaagaggcttaccaagccgacatcctgtacggcaccaacaac
gaatttggttttgactacctgcgcgataacatggcgtttcgccctgaagatcgcgtgcaa
cgtgctcgcttctttgctgtggtcgatgaagtggactcaatcttaatcgatgaagcacgt
accccgctgattatctcaggtcctgcggaagacagttcggatctctacatccgtatcaac
aagttgatcccgctactgcaaaagcaagataaagaagattcggaagagtaccgcggtgac
ggtcacttcaccgtggatgaaaaatctaagcaggtgcatctgaccgaaacgggtcaagag
ttcgttgaagagctgctagtgaaaaacggcatgatgcaagagggtgatacgctttactct
cccgctaacattagcttgctgcaccacgttaacgcggcattacgtgcgcatgttctgttt
gaaaagaacgtcgattacatcgtgacacccgatggtgaagtggtgatcgttgatgaacat
accggtcgtactatgccgggtcgtcgctggtctgatggtctgcaccaagcggtagaagca
aaagaaggggtgaagatccagaacgaaaaccaaactctggcttcgatcactttccaaaac
tacttccgtctgtatgaaaagctgtctggtatgacgggtaccgctgataccgaagcgttt
gaattccaacaaatttatggtttggaaacagttgttattccaaccaacaagccgatggtg
cgtaacgatatgccggatgtggtgtatcgctctgaggcggaaaagtttgccgcgatcatt
gaagatatcaaacagcgtgttgagaaaggtcaacctgtgttggtgggtacggtttcgatt
gagaaatcagaattgctctccaatgcactgaaaaaagcaggcatcaagcacaatgttctg
aacgcgaagttccatgaaaaagaagcggaaattgttgctgaagccggtaaacctggcgca
gtcaccatcgcaactaacatggcgggtcgtggtacggatatcgtattgggtggcagctgg
caagccaaagtggagaagctggacaacccaacccaagagcaaattgatgcgattaaagct
gagtggaagcaagtgcacgatcaagtgttgcaagcgggcggcctacacatcattggtact
gagcgtcacgaatctcgccgtatcgataaccagctacgtggtcgttctggtcgtcaaggt
gatgcgggttcatcgcgtttctatctctcaatggaagatactttactgcgtattttcacc
tctgatcgtatggcggcattgatccaaagcggtatggatgaaggcgaagcgattgagtca
aaaatgctctctcgctcgattgaaaaagcgcagcgtaaagtagaaggccgtaacttcgac
attcgtaaacagttgctggaatacgatgacgtagcgaacgatcagcgtaaagtcgtttac
gaactgcgtgatgaactgatgagcgcagatgacatcagcgacatgatcgcgcaaaaccgt
gaagatgtgctgaacgcggtgatggatgagtacattccgccacaatctctggaagatatg
tgggatatcaaagggttggaagatcgcctaaagaacgatttcgatctaccactaccgatc
caatcttggttagatgctgacaacaagctgtatgaagaagcgctacgtgagcgcatcatc
gagcaagcggttgaggtttataaagccaaagagcaagcggttagccctgcggtgatgcgt
aactttgaaaaatctgtgatgctgcaaacgctagatacactgtggaaagagcatctggcg
gcgatggatcacttgcgtcaaggtattcatctacgtggttacgcacagaaaaacccgaaa
caagagtacaagcgcgagtcgtttgaactgtttgaagatctgcttgagtcactcaaatcg
gatgtgatcactgtcttgtccaaagtccgtgttcagcagcaagaagaagtggagcgtatg
gaagctcaacgccgcgcgcaagctgaagaagcggcgcgtcatgcacaagcgcaacacgcg
agtgctgatgatgctgagcaagacgagtcgaaccagccaatggtgcgtgatgaacgcaaa
gtgggccgtaacgaaccttgtccatgcggtagcggtaaaaaatacaaacagtgtcacggg
caaattaactaa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_2576
Entry
VC_2576           CDS       T00034                                 
Name
(GenBank) preprotein translocase, SecY subunit
  KO
K03076  preprotein translocase subunit SecY
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_2576
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_2576
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_2576
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_2576
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_2576
SSDB
Motif
Pfam: SecY
Other DBs
NCBI-ProteinID: AAF95717
UniProt: P78283
LinkDB
Position
I:complement(2754257..2755591)
AA seq 444 aa
MARKPGQDFRSAQSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTI
VEMFNMFSGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYT
RYGTLVLATFQAIGIATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERG
IGNGISILIFAGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQR
RIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESST
FGWLTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPG
EQTAKYIDKVMTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQ
VQTHLMSHQYESVLKKANLKGYGR
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggctagaaaaccaggacaagattttcgtagtgctcagagcggcttaagtgaactgaag
tcgcgcttattcttcgtaattggtgcacttttagtattccgagccggctcttttgtgccg
attcctggtattgacgctgctgtacttgccgaattgttcgaacagcaaaaaggtaccatc
gtagaaatgtttaacatgttctccggtggtgctcttgagcgtgcatctattttagcactg
ggcatcatgccgtatatttcggcgtcaattgttgtccagttgctaacagtagttcatcca
gcgttagcggaactcaagaaagagggtgaagcaggccgtcgtaagataagccaatatacg
cgctacggcacgcttgtacttgcaacattccaagcgattggtattgcaacaggcttacca
aacatggtcaacaatctggtcgttatcgaccaaaccatgtttaccctgattgcgaccgtg
agtttagtaaccggtaccatgttcttaatgtggttaggtgaacaaattacagagcgtgga
attggaaacggtatttcgatactgattttcgcaggtattgttgctggattgcctaaagca
atcggtcaaacaatcgagcaagcgcgtcaaggtgaactgcatgtacttcttctgctgtta
atcgcagtgttagcttttgctgtgatttacttcgttgttttcatggagcgtggtcaacgt
cgtatcgttgtgaactacgcaaagcgtcaacaaggtcgtaaagtgttcgcagcacaaagc
actcacttgccgttgaaaatcaacatggctggtgtaattcctgcgatttttgcgtcaagc
attatcctgttcccaggaacattggcgcagtggtttggtcagaacggcgaaagcagcaca
ttcggttggctaactgatgtgtctttagctttgagcccaggccagcctctgtatgtaatg
ctttatgcagcggcgattatcttcttctgtttcttctataccgcgttggtgtttaacccg
cgtgaaacggcagataacttgaagaagtctggtgcattcgtacccggtatccgcccaggt
gagcagacagcgaaatacatcgataaagtaatgacacgtttaacccttgcaggtgcactg
tatattacttttatctgtctgatccctgagttcatgatggtcgcttggaacgtacgtttc
tactttggcggcacatcactactgattgtagttgtcgtgatcatggactttatggcacag
gtacagacccatttgatgtctcatcaatatgagtctgtgttgaaaaaagcaaatctgaaa
ggctacggccgttaa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_2653
Entry
VC_2653           CDS       T00034                                 
Name
(GenBank) protein-transport protein SecB
  KO
K03071  preprotein translocase subunit SecB
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch03060  Protein export
vch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VC_2653
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VC_2653
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_2653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:vch03110]
    VC_2653
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vch02044]
    VC_2653
Chaperones and folding catalysts [BR:vch03110]
 Other chaperones and cochaperones
  SecB
   VC_2653
Secretion system [BR:vch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VC_2653
SSDB
Motif
Pfam: SecB
Other DBs
NCBI-ProteinID: AAF95794
UniProt: Q9KNS8
LinkDB
Position
I:complement(2824274..2824738)
AA seq 154 aa
MAEAAQAPQQQFAIQRIYLKDVSFEAPSSPVMFQKEWNPDVKLDLDTQSRELGQGVYEVV
LRLTVTVKNAEETAFLCEVQQAGIFSAEQMEAGQLAHCLGAFCPNILFPYARETISSLVV
KGTFPQLNLAPVNFDALFMNYLQQQAQEGATANA
NT seq 465 nt   +upstreamnt  +downstreamnt
atggctgaagcagcacaagccccacaacaacagtttgctatccaacgtatctatctaaaa
gatgtctcttttgaagcgccaagctcaccagtgatgttccaaaaagagtggaacccagat
gtcaaactggatctcgacacgcaaagccgtgaactgggccaaggcgtttacgaagtggta
ctgcgcctgacagtgactgtgaaaaacgcagaagagaccgcattcctgtgtgaagtacaa
caagcgggtatcttcagtgcagagcagatggaagcaggccaattggcccattgcttgggt
gctttctgcccgaacatcctgttcccatacgcacgtgaaaccatttcaagcctagtggtg
aaaggtactttcccacaactgaaccttgctccagttaactttgacgcgctgttcatgaac
tacctgcaacagcaagctcaagaaggcgcaacggcgaacgcataa

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