Vibrio cholerae O1 El Tor N16961: VC_0126
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Entry
VC_0126 CDS
T00034
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00300
Lysine biosynthesis
vch00470
D-Amino acid metabolism
vch01100
Metabolic pathways
vch01110
Biosynthesis of secondary metabolites
vch01120
Microbial metabolism in diverse environments
vch01230
Biosynthesis of amino acids
Module
vch_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VC_0126
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VC_0126
Enzymes [BR:
vch01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VC_0126
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AAF93303
UniProt:
Q9KVL6
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All DBs
Position
I:120452..121324
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AA seq
290 aa
AA seq
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MGVRIGITGVKLSSMHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQ
LLVVEAPYDPESDFHYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKM
VLNVEEEDLITVNMGVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVV
DDIRTAAVETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAA
VAVGILQGLLDEQVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQISC
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgttagaatcggtattaccggagtaaagttatcttctatgcatttccatttttct
aaaatgcacggtttgggcaacgactttatggtcgtggactgtattacccaaaacgtcttc
ttctctccggaattgatccgccgtctggcggatcgccatacgggagtcggctttgatcaa
ttgttggtggttgaagcgccttacgatccagaatcggatttccattaccgcattttcaat
gccgatggcagcgaagtggagcagtgtggcaatggcgcgcgctgttttgcccgttttgta
cgcatgaaagggttaaccaacaagtacaccatccatgtcagtaccaagaaaggcaaaatg
gtactcaatgtggaagaggaagatctgatcaccgtgaacatgggtgtgccggagtttgag
ccgaacaagatcccatttcgcgccaaacagagcgaaaaaacctacattctgcgtgtcggt
gaacacaccttgttttgcggcgcggtgagtatgggcaacccgcatgtagtgactgtggtg
gacgatatccgcactgctgcggtagaaaccttagggccgcttttggaatcgcacgagcgt
ttccctgagcgcgtcaacgccggttttatgcaggtcgtgagccgtgatgagatcaatttg
cgcgtgtatgaacgtggtgcgggcgaaactcaagcttgtggcagtggcgcgtgcgccgcg
gttgcggtaggcattttgcaaggtttactggatgagcaagttcgtgtccatcttcccggt
ggtgagctggaaatccactggcaaggccccggcaaaccgctgtatatgacaggcccggct
actcatatctacgatggccaaatctcttgctaa
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