Vibrio cholerae O1 El Tor N16961: VC_0246
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Entry
VC_0246 CDS
T00034
Name
(GenBank) lipopolysaccharide/O-antigen transport protein
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VC_0246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vch02000
]
VC_0246
Transporters [BR:
vch02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
VC_0246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
DUF3290
Motif
Other DBs
NCBI-ProteinID:
AAF93422
UniProt:
Q9KVA3
LinkDB
All DBs
Position
I:252918..253712
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AA seq
264 aa
AA seq
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MYFLGMKMLKDIVSVFYNWRIVHLLGVSTLRSRYSRSKFGQTWLSITMFVQILCIGLIWS
LIWRMGVDDYLPYVGVGHIIYLFYTQTINESTGIFVADARVYLNDRQPFMLSVGAHIYRN
VLILLHNIPTIFLLVIWSSSANFEFSFMFVISLSLSLFFVLFASYFCAVISTRFRDLIQL
IGLLMQLAFFVSPVMWKVSFLPEQYQNYVYINPFASLLELIRNPIIGIDVNPLAFVSLVA
WTFIIGMVSYFSYKVLDKKVIFWV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttgggaatgaaaatgcttaaagatatagtttcggttttttataattggcgt
attgtgcatctattgggggtttctacacttagaagtagatactctcggtctaaatttgga
caaacttggttaagcatcacaatgttcgtacaaattctctgtatagggctaatttggtct
ttaatatggagaatgggagtagatgattatttaccatatgtcggtgttggacacataatt
tacttgttttatactcaaacaattaacgaaagcacaggaatcttcgttgcagatgctcga
gtatacctaaatgataggcaaccttttatgctttcagtcggtgctcacatatatcggaac
gtgctgattcttcttcataatataccaaccatatttttgcttgtcatatggtctagctcg
gcaaactttgaatttagttttatgtttgtcatttcgttgagtttaagtctgtttttcgtc
ctatttgctagctatttttgtgctgttatttcaacgagatttagagacttaatccagctg
attgggcttttgatgcagttagctttctttgtaagtcctgtcatgtggaaagtaagcttt
ctacccgaacaatatcaaaactatgtgtacataaatccatttgcttcgctattggaatta
attagaaatccgataataggaatcgacgttaatcctttagcatttgtttcgttagtagca
tggacttttataattggtatggtcagctacttctcgtacaaagtactcgataaaaaagtc
attttttgggtgtag
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