Vibrio cholerae O1 El Tor N16961: VC_0288
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Entry
VC_0288 CDS
T00034
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00030
Pentose phosphate pathway
vch01100
Metabolic pathways
vch01120
Microbial metabolism in diverse environments
vch01200
Carbon metabolism
Module
vch_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
VC_0288
Enzymes [BR:
vch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
VC_0288
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
FAD_SOX
Motif
Other DBs
NCBI-ProteinID:
AAF93462
UniProt:
Q9KV69
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Position
I:296819..298675
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AA seq
618 aa
AA seq
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MFSTGSGELCDSSAARAGGSMIHPILAKVTQNLTERSREARAAFIARSQAQEKAGKGRTS
LSCGNLAHAVAASCSTEKKAILDFTRSNVAIVTSYNDMLSAHQPYQHYPDRIKMVLAEYG
HTAQVAGGVPAMCDGVTQGQPGMDMSLFSRDLIAQATALSLSHNVFDATLLLGICDKIAP
GQLMGALSYAHLPTAFMPAGLMATGISNEEKVDIRQKYAAGEVGKDALLNMECQAYHAPG
TCTFYGTANTNQLVFEAMGLMLPGSAFVHPHSALRQALNDDATVKIASMTQGSAQYRPLY
QVVTEKSLLNGIVALLASGGSTNHTIHMLAVARAAGILLTWQDISDLSDVVPLLAKVYPN
GPADMNAFQQAGGVPALMKRLHESKLLHSDVTPVFGEFRDQLTLPELVDGELCWKACEGT
RDAQVIAASGECFQTTGGTKMLNGNLGRAVIKVSAVKEEQRIIEAPAVVFQCQHQVEAAY
QRGELNKDCIVVVTHNGPAANGMPELHKLMPILGNVQKAGFKVALVTDGRLSGASGKIPS
AIHVSPEAVRGGAIGLVRDGDLLRLDCTTGTLENLTDMSHRQALALDTERDQQMWGRELF
KVMRQAVSSAEQGASFIV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
ttgttcagtacaggaagtggtgagctgtgcgattcaagcgctgcaagagcaggagggtct
atgattcatcctattttagccaaggtcactcaaaacctgacagagcgtagccgtgaagca
cgtgcggccttcattgcacgcagtcaagcacaagaaaaagccggcaaaggtcgcacctca
ctctcttgcggtaatttagcccatgcggtggcggcctcttgcagcacagagaaaaaagcg
atcctcgatttcacgcgcagtaatgtggcgattgtgacttcctataacgatatgctcagt
gcgcatcagccttatcagcactatccagaccgcatcaagatggtgttagccgagtacggc
cataccgcgcaggtcgccggtggcgtacccgccatgtgcgatggcgtgacccaaggtcag
ccggggatggatatgtcgctgttttcccgtgatttgattgcgcaggcgaccgcactttct
ctcagtcacaatgtgtttgatgccactttactgctcggtatttgtgacaaaatcgcgccg
gggcaattgatgggcgcgctttcttacgcccatctgccgaccgcgtttatgcctgcgggt
ttaatggcaaccggcatcagtaacgaagagaaagtggatattcgccaaaagtatgcggcg
ggtgaagtgggtaaagacgcgctgctcaatatggagtgtcaggcttaccacgcgccgggt
acgtgtactttctacggcaccgccaacaccaaccaattggtgtttgaagccatggggctg
atgttgccgggctcggcgttcgtgcatcctcattcggcgctgcgccaagcattgaacgat
gacgcgacggtaaaaattgccagcatgacccaaggttcagcgcagtatcgtccgctctat
caagtcgtaaccgagaaaagtctgctcaatgggattgtcgctctgctggcttctggtggc
agtacgaaccacaccattcatatgttggcggtggcacgtgccgcggggattttgctgacc
tggcaggacatcagtgatctgtcggatgtggttccgttgctggcgaaggtttacccgaat
ggccctgcggatatgaatgccttccaacaagcgggcggcgtgccagccttaatgaagcgt
ttgcatgaatctaaattgctgcactcggatgttacaccagtatttggtgagtttagggat
caactgacgctgcctgagttggtggacggggagctatgttggaaggcgtgcgaaggcacg
cgtgatgctcaggtgatcgcggcgagtggcgagtgcttccaaaccactggcggcactaaa
atgctgaacgggaacttaggccgcgcagtgatcaaagtctcggcagtgaaagaagagcaa
cgcatcattgaagcgccagcggtagttttccagtgtcagcaccaagtggaagcggcttac
cagcgtggtgaactgaataaagactgcattgtggtggtgacccacaatggccccgcggcg
aatggcatgcctgagctgcacaaattgatgccgattttgggcaacgtgcaaaaagccgga
ttcaaagtcgcgctggtgaccgatggtcgtttgtcgggcgcgtcaggtaaaattccatcg
gcgattcacgtgtcaccagaagcggtacgcggtggtgcgattggtttagtgcgtgatggg
gatttgctgcgcttggattgcacaacaggcacgcttgagaacttaaccgacatgagccat
cgccaagctctcgctttagataccgagcgcgatcagcaaatgtggggacgcgaattgttt
aaagtgatgcgccaagcggtctcttccgccgaacaaggggcgagctttattgtttaa
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