Vibrio cholerae O1 El Tor N16961: VC_0290
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Entry
VC_0290 CDS
T00034
Name
(GenBank) factor-for-inversion stimulation protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_0290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vch03000
]
VC_0290
03036 Chromosome and associated proteins [BR:
vch03036
]
VC_0290
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_0290
Transcription factors [BR:
vch03000
]
Prokaryotic type
Helix-turn-helix
Other families
VC_0290
Chromosome and associated proteins [BR:
vch03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VC_0290
DNA repair and recombination proteins [BR:
vch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VC_0290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_30
Xre-like-HTH
DUF134
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AAF93464
UniProt:
P64127
LinkDB
All DBs
Position
I:complement(299889..300185)
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AA seq
98 aa
AA seq
DB search
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaatctgacttcagaagctttaaccgttactaccgtaacttcacaagac
caaatcacgcaaaagccactgcgtgactctgttaaagcgtctcttaaaaactacttggct
caactgaatggccaagaagtgactgaactgtatgaattagttctagctgaagttgaacaa
ccacttctggacaccatcatgcaatacactcgcggtaaccaaactcgcgcagcaactatg
atgggtatcaaccgcggcactcttcgtaagaaactgaaaaaatacggcatgaactaa
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