Vibrio cholerae O1 El Tor N16961: VC_0405
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Entry
VC_0405 CDS
T00034
Name
(GenBank) MSHA biogenesis protein MshE
KO
K12276
MSHA biogenesis protein MshE
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_0405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vch02044
]
VC_0405
Secretion system [BR:
vch02044
]
Type II secretion system
MSHA pilus biogenesis protein
VC_0405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
nSTAND_NTPase5
AAA_16
AAA_22
AAA_30
AAA_29
AAA_11
ATPase_2
nSTAND3
ResIII
SRP54
AAA_19
AAA_23
AAA_7
AAA_14
AAA_18
NTPase_1
Zeta_toxin
Rad17
cobW
AAA
DEAD
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAF93578
UniProt:
Q9KUV7
Structure
PDB
PDBj
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Position
I:431374..433101
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AA seq
575 aa
AA seq
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MPINKLRKRLGDLLVEEGIVSEAQLEQALNAQKNTGRRLGDTLISLGFLSETQLLNFLAQ
QLSLPVIDLSRAHVDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLN
QLPDYGFEFVIAPEKQLVDGFDRYYRRTKEIVSFAEQLHAEHKTNDSFDFEITDSDSDEV
TVVKLINSLFEDAIQVGASDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKL
MANLDISEKRLPQDGRFNIRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGI
PPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISR
INQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTN
DAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRFPNQ
AAAKFTRGRGCQNCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFSKAARSNTDYKPL
LASAMELALQGIVSLDEVMSLGEGDSSGLVEPIYL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgccaattaataaactgcgtaaacggcttggtgacttgctggttgaagaggggattgtg
agcgaagcgcagcttgaacaagcgctcaatgcccagaaaaataccggacgccgcttaggg
gataccttaatttcgcttggctttttaagcgaaacccagttgctgaactttttggcgcag
caattgagtttgccagtgatcgatctgagccgtgcccatgtcgatattgatgctgttcct
ttactgcctgaagttcatgcccgccgtttgcgtgcgctggtgataggccgcagtggtgat
acgctgcgcatagccatgagtgatcctgcggatttgtttgctcaagaagccttgctcaac
cagttgcctgattatggttttgagtttgtcatcgcccctgagaagcagttggtcgatggc
tttgatcgttactatcgccgcaccaaagaaattgtctcgtttgccgagcaattgcatgcc
gaacacaaaaccaatgatagttttgattttgagatcaccgattcagatagcgatgaagtg
acggttgttaaactgatcaactcgctgtttgaagatgcgattcaagtgggagcctcggat
atacatattgagccggatgccaacgtactgcgtttgcgccaacggatcgatggggtattg
catgaaaccttgctccatgaagtgaatatcgcctcagccttagtgctgcgcttaaaatta
atggcgaatctggatatttcagaaaaacgccttccgcaagatggccgctttaacatccgt
gtaaaaggacaatccgtcgatatccggatgtcaaccatgcctatccagcacggtgaatcg
gtggtgatgcgtttgctcaaccaatctgcaggggttagaaagctcgaagagtcaggtatt
ccgcctcatttattgctgcgtttgcgccatcagttgaaacgccctcatggcatgattctg
gtgactgggcctaccggctcggggaaaaccaccaccttgtatggcgcactcaacgagctc
aatacgtccggcaaaaaaatcattactgcggaagatccggtggaataccggatttcacgg
atcaatcaggtgcaagtgaacccgaaaatcaatctcgatttctcgacgttactgcgcact
ttcttgcgccaagacccagatattattttggtcggtgagatgcgtgaccaagagacggtc
gaaattggcctgcgcgctgcattaaccggtcacttagtcttaagtactctgcacaccaat
gatgccgtcgatagcgcgctgcgtttgattgatatgggggcgcccggttatctggttgcc
agtgcggtacgtgccgtggttgcgcagcgtttagtgcgaaaagtctgtccagattgtagt
ggacatgatgaggtggatgaagcgcgtcgccaatggcttgtgacgcgtttccctaatcaa
gctgccgccaaattcactcgtggacgcggctgccagaactgtaacttaaccggttatcgc
ggccggatcggtgtatttgaaatgcttgagctggatcagccgatgatggattgcttgcgg
gcaaatgatgctgtggccttctctaaagccgcacgcagtaacacagattataaaccgcta
ctggcttcggcgatggagttagcgctacaaggcatcgtcagtcttgatgaagtgatgtcg
ctgggtgaaggtgattcctctggtttggttgaaccgatttatctgtag
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