KEGG   Vibrio cholerae O1 El Tor N16961: VC_0530
Entry
VC_0530           CDS       T00034                                 
Name
(GenBank) conserved hypothetical protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:vch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vch03016]
    VC_0530
Enzymes [BR:vch01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     VC_0530
Transfer RNA biogenesis [BR:vch03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VC_0530
 Prokaryotic type
    VC_0530
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AAF93698
UniProt: Q9KUJ0
LinkDB
Position
I:561265..562350
AA seq 361 aa
MTDILSPLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGHGEHLMVRIRKTGENTSFVA
NELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRH
DKKLRPGDLQGNEFVVTLSEVSDVAAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARR
WGRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAEQQMFNVDGD
LALWDQRLQAGEVAISAALAGDNALPTSGQALPLEQAELDAEPDLMALIRGNRMRHDRRA
IALKAQNLSWQVQEDQITLRFSLDAGSFATSLVRELIEEIPVVRHYDQGHEQESRDSESE
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgactgatattctctctcctctggcttatttgtgcggtaaaccgactgcgaaggccaaa
ctcaaagcgctgccagaacacttccaagtcaatgaagtgttgggctactccttaacggga
cacggcgagcacttgatggtgcgtattcgtaagacaggggagaacaccagctttgtggcc
aatgaattagccaaagcctgtggcgtaccttcacgcgcggtgagctgggcgggtttaaaa
gacaggcatgccgttaccgagcagtggttgagtgtgcatctgccgaatggcgaaacgccg
gatttctctgcgtttctagcacaataccctagcattgaaattcttgaggtgactcgccac
gacaaaaagcttcgtccgggtgatttgcaaggcaatgaatttgtcgtcaccctatcggaa
gtaagcgatgttgcagcggtattaagccgtttagaaacggttgctgaattgggcgttccc
aattacttcggtagccagcgttttggacgtcatggcaataacctcagtgaggcgcgccgt
tgggggcgtgacaatgtccgttcgcgcaatcagaatcagcgcagcttatatctgtctgcg
gctcgttcgtggattttcaaccagattgtctcaaagcgaattgagcagggctgttttgcc
cgctttattgaaggtgatatcgctttagctgagcagcaaatgtttaatgttgatggtgat
ttagccctttgggatcagcgtttgcaagctggagaagtagcgatttcagcggctttggcg
ggcgataatgccttgccgacttctggtcaagccttgccactggaacaagctgaattggat
gcagagcccgatttaatggcgctgatccgggggaatcgtatgcgccatgatcgccgtgcg
atcgccttaaaagcgcaaaacttaagctggcaagtgcaagaagatcaaatcactctgcgt
ttctcattggatgcgggtagctttgccacttccttagtgcgtgaattgatcgaagagatc
ccagtggtgcgtcattacgatcaaggccatgaacaagagagccgcgattcagagagcgaa
gattaa

DBGET integrated database retrieval system