Vibrio cholerae O1 El Tor N16961: VC_0535
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Entry
VC_0535 CDS
T00034
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VC_0535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_0535
DNA repair and recombination proteins [BR:
vch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VC_0535
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AAF93703
UniProt:
Q9KUI6
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Position
I:complement(565832..568420)
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AA seq
862 aa
AA seq
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MMKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISL
TKRGASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVT
PGTVTDEALLSERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSP
RELLFPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLC
AAGCLIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVL
DHCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILA
RLALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKE
NPPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGF
YIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFD
LLMPHLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMN
EPFIANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRI
FTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAE
WLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGL
AVAGLAGVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEPSAVEQALAG
VDPDQLTPRQALDMLYQLKKLL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcgaacgcctcaccgagcgagtctctttcgcaccacaccccgatgatgcaa
cagtatttaagactcaaggcggaaaacccagacattctgctgttctatcgcatgggtgat
ttttacgaactgttttatgacgatgccaaacgcgcctctgaactgctagatatttcctta
accaaacgcggcgcatcggcgggtgaacccattcctatggcgggtgtgcctttccatgcc
gtggaaggttatttggcgaaactcgtccagatgggggaatcggtcgcgatctgcgaacag
attggcgatccagccaccagcaaaggccccgttgagcgcaaagtagtgcggattgtgaca
ccgggaacggtgaccgatgaagccctgctctcagagcgagtcgataacctgatcgcggcg
atttatcaccataacggccgctttggttatgcaaccatggatatcacctccggtcgtttt
cagctcagtgagccgcaaaccgaagaagagatggccgccgagctgcaacgcacttcgcct
cgtgaactcttgtttcctgaagatttttcgccagtgcatctaatggcaagccgccaaggc
aaccgccgtcgcccgatttgggaatttgaactcgataccgcgaaacagcagctcaaccag
caatttggcacgcgcgatctggttggctttggggttgagcaagcaaaacttggcttgtgc
gcagcaggctgcttgatccaatacgtcaaagatactcagcgtaccgctttgccacacatt
cgttcactgacttgggatcgccaagatcaatcggtgattttggatgccgcgacgcggcgc
aaccttgaactcactcataacttggcgggtggaacagataacacgcttgcagaagtactc
gaccattgtgctacccccatgggcagccgcatgctcaaacgttggatccaccaaccgatg
cgcgataacgccactctcaatcagcgtttagatgcgatcactgagctcaaagaaaccgct
ttgtatggggaactgcatcccgtgctcaaacagattggcgatattgaacggatcctcgcc
cgtctagcgctgcgttcagcgcggccgcgcgatttagctcgcctacgccatgccatgcag
cagttacctgaattgcactcggtcatgagcgagcttaagcagcctcaccttaccgagcta
cgcacccatgccgagccaatggatgaattgtgcgatttactcgaacgtgcgatcaaagaa
aacccacccgtggtgatccgcgatggtggcgtgatcgccgatggttacagtgccgaactc
gatgaatggcgcgatttagccaatggcgcaaccgaatttctggaacgcttggaagccgaa
gagcgcgatcgtcacggcattgataccctgaaagtgggttataacaatgtgcacggtttc
tacattcaagtgagccggggtcagagccatttagtgcctccccactatgtacgccgtcaa
accttaaaaaatgctgagcgttacatcatcgaagaacttaaacagcatgaagataaagtg
ctcaattctaagtctcgtgctttagcgttagaaaaacagctgtgggaagagttgttcgat
ttgctgatgccgcatcttgagcagctgcaacaactggcggcttccgttgctcaattggat
gtgctgcaaaacctcgcagagcgcgcagaaaacttggaatattgtcgcccaacgctggtt
caagaagcgggcattcacatccaaggtggtcgccaccctgtggtagagcgagtaatgaat
gagccgtttatcgccaacccgatcgaacttaatccacagcgacgcatgctgatcattact
ggtccgaatatgggcggtaaatcgacttacatgcgtcaaaccgccttgattgcactgatg
gcgcatatcggtagttatgtgccggctgaaagtgcgtcaatcggcccactagatcgtatt
tttacccgtatcggcgcgtccgatgatcttgcgtccggccgctcaacctttatggtggag
atgacggaaaccgccaatattttgcacaatgcgacccgtaacagtttggtgttgatggat
gagattggccgcggtaccagtacttatgacggactctcgctcgcttgggcgagtgccgag
tggcttgccaaagagattggtgccatgacgctgtttgctactcactattttgagttaacc
gaactgccgaatgtgttacctcatctagcgaatgttcatttagatgcggttgaacatggt
gatggcatcgcctttatgcacgcagtgcaagagggtgccgcgagtaaatcgtatggttta
gccgtagcaggactggctggcgtacccaagcccgtgattaaaaatgcgcgcgccaaatta
caacaacttgagctattaagctcacaacctgccgagactcgtaagccaagccgcgtcgat
attgccaaccagctgagcttaattcctgagccgagtgctgttgagcaagccttggcaggc
gtagatcctgaccagctcactcctcgccaagctctagatatgctctatcaattgaaaaag
ctgctctag
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