Vibrio cholerae O1 El Tor N16961: VC_0703
Help
Entry
VC_0703 CDS
T00034
Name
(GenBank) c-di-GMP phosphodiesterase A-related protein
KO
K20966
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_0703
Enzymes [BR:
vch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VC_0703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PP-binding
HAMP
Motif
Other DBs
NCBI-ProteinID:
AAF93868
UniProt:
Q9KU26
LinkDB
All DBs
Position
I:complement(751247..753622)
Genome browser
AA seq
791 aa
AA seq
DB search
MKLNHRILLLIAPVILLSAAASSYIIYTSQKNALLKRTDSYLQLNIEKLASHYRQAQSLV
SSYAFTLAKSDIIRHYFSLEKNPYRELELVDNLRETLQILQPNEKQLVSLSILNGHEELL
YYAENSSDPFAELDPKVMAYIKQRFASTQKNSDISYTVNSAGEDILVRYDMLDTQTLSTP
LSYNRQDVFFVVVYVVLEQFSQLRKKIEFDNQSPIFFTHSPPSYRTGLLQSVELQPGFYA
ILDPAPKLINAQLHSIQRELLLSFGVSALVTVLMLLLLLYRHVINPILHLDKQLEEVENN
QRKNIEKLNTDDEIGRLSSRFYAMYSELHSTYQRTKALAENDHLTKLANRYQFQVQADLL
LSRCYDTQHIWVMYIDLDNFKYVNDKYGHQIGDSLLVSFATHVRQLCKNFEASHNTYSIA
ARLSGDEFAILLVSPKRFNDCAKIFAQRLLAPIQNKDNSPLSHFPITASIGIATFPKDGE
HIEKLLLNADTAMYQAKNAGKNQVAYYSQALDQIVQRRNNIERALRLGLFDQEFNLAYQP
YFTCSGKRLVGFEVLLRWQSELLGEVSPEEFIPIAEQTGLFGTIDRWVISKAFQEISTLQ
AIVKEPIQVSINLSSAELNSLKLAQFIHRQAEQFGVSPAWIDFEITETFAADSQSFPLLH
ELSRLGYGLTIDDFGSGYTSITQLVQYPVQKIKFDRHFLDTLIATNKQNVIRPLIDLCHS
QSMKVTAEGIESETMHQWLADYECDYMQGFYFGYPMSLSEISPWLHASNHKKKSYAQDHY
CFTEPSQSECR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaccatagaattctgttactgattgcaccggtgatcctgctcagtgcagcc
gcatcaagctacatcatttataccagtcagaaaaatgcgctgctaaaaagaaccgacagt
tacctgcagttgaatattgaaaagttagccagccactatcgacaagctcagtcgctcgtc
agcagttatgccttcacgctggccaaaagtgacatcatccgccactacttctctttagaa
aaaaatccttaccgcgaactagaactggtggataacttacgtgaaaccctgcaaattttg
cagccgaatgaaaaacagctcgtatcgttatcgatcctcaatggccatgaagagctgctt
tattatgcggaaaatagctccgatccatttgccgaacttgaccctaaggtgatggcgtac
atcaaacagcgttttgcatccacacaaaaaaactctgatatcagctacaccgtcaactca
gcgggtgaagatattttggttcgctacgatatgctggatactcagacactctcaacgccg
ctcagttataaccgccaagacgtgttttttgtggtggtgtatgtggtgcttgagcagttc
agccaactgcgcaaaaaaattgaatttgataaccagagcccgatattttttacgcactca
cctccgagttaccgcacgggcttgttgcaatcggttgaattacaaccgggcttttacgcc
atactcgaccctgcaccgaaactgattaacgcccagcttcactccattcagcgcgaactt
ttactctcttttggcgtttcggcactggtgacggtactcatgctactgctccttctctat
cgccatgtgatcaatccgatcctgcatttggataaacagcttgaagaggtggaaaacaac
caacgtaagaacattgaaaaactcaatactgacgatgaaattgggcggctttcctcgcgt
ttttacgccatgtacagcgaacttcattcaacctatcaacgcacgaaagcacttgcggaa
aacgatcacctcaccaagctggctaaccgctatcaatttcaagttcaagccgatctgctg
ctatcacgttgttacgatactcagcatatctgggtcatgtatatcgacttagataacttc
aagtacgttaatgataagtatggtcaccaaatcggtgattccctactggtcagcttcgcg
acccacgttcgccagttatgtaaaaattttgaggccagccataacacctacagtattgcg
gcccgtttatctggtgatgagtttgctattttgctcgtctcccccaaacggtttaatgat
tgtgcgaagatctttgctcaacgcttgttggcaccgatccaaaataaagacaactcacca
cttagccattttcccattactgccagcattggtattgcgaccttccctaaagatggcgaa
cacattgagaaattgctgctcaatgccgataccgccatgtatcaagcgaaaaatgcgggc
aaaaaccaagtcgcttactattcgcaggcgttagatcaaatagtacagcggcgcaataat
attgaacgagcactgcgcttagggttatttgatcaagagttcaatttggcttatcaacct
tactttacttgctcagggaaacgcttagtgggcttcgaagtattgctgcgctggcaatct
gaattgctcggtgaagtgtcgccggaagagttcattccaattgcagagcaaactggattg
tttggcacgatcgaccgctgggtcatttcaaaagcttttcaagagatatcaactctacaa
gccatagtgaaagagccgatccaagtgtcgatcaacctctcttcggcagaactcaattcg
ctgaaattggctcaatttatccatcgacaggctgagcagtttggcgtctcccctgcatgg
atcgattttgaaatcaccgaaacgtttgccgcagattcgcaaagcttcccattgctgcac
gaactctcgcgtcttggctatgggttaacgattgatgattttggctcaggctatacctct
attactcagttggtgcagtatccagtacaaaagattaagtttgatcgccattttttggat
acactcatcgccaccaacaaacaaaatgttattcgtccactgattgatctctgccactct
caatccatgaaagtgaccgctgaaggcattgagagtgaaactatgcatcaatggttggcc
gattatgagtgcgattacatgcaaggcttctactttggttatccaatgagcctaagcgag
atctccccatggcttcatgcctccaatcataaaaagaagagttatgcgcaagatcattat
tgcttcacagaacccagccaaagtgaatgccgttag
DBGET
integrated database retrieval system
