Vibrio cholerae O1 El Tor N16961: VC_0709
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Entry
VC_0709 CDS
T00034
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vch03009
]
VC_0709
Enzymes [BR:
vch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VC_0709
Ribosome biogenesis [BR:
vch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC_0709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AAF93874
UniProt:
Q9KU20
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All DBs
Position
I:757851..758825
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AA seq
324 aa
AA seq
DB search
MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVM
GGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL
FHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT
AGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM
AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAP
VPDDMVEMTLALREDAKLNRTEEY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcagattgaattaactcaaacagtaaaagatagccagcttggtcaacgtctt
gatcaagctgtggctgaattatttaccgacttttcccgctcacgtttaaaagagtggttg
ttggaaggcaagattgccgtgaatggtgatgtcatcaccaaaccgcgtaccaaagtgatg
ggtggcgaggtgattaccgttcaggcagaactggaagacgaacagcgctgggaagcgcag
gatttgccactgaacattgtgtatgaagatgacgacattatcgttattaacaaaccgcgt
gactttgtggttcaccccggtgccggtcaggcggataaaaccgtgcttaacgcattgctg
ttccattattcgccgattgctgaagtgccacgtgcaggcatcgtccatcgtctcgataaa
gatacgacgggtttgatggtggtcgcgaaaacggttcccgcgcaaacacgcttggtacgt
gcactacaaaagcgcgacgtgactcgtgagtacgaagcgattgtgattggcacaatgacc
gcgggtggcatgattgataagccgattggccgtcactcgaccaaacgtactttaatgtcg
gtctccccgatgggcaaacatgccgtgacccattaccgtgtggcagagcatttccgtgaa
catacgcgtttgcgtctacgtttggaaacgggtcgtacccaccaaattcgtgtgcacatg
gcttatttgcaacacccactcttgggtgatacggcctatggtggtcgtgcacgcattccg
aaaggtgcgacggaagaactgacggaaatgattcgtgacttcgatcgtcaagcactgcac
gcggtgatgttgaaatttgagcatccggttacgggggaagagctcgaattccatgcacca
gtgcctgatgatatggttgagatgacgcttgcactgcgtgaagatgcgaagctaaaccgc
actgaagagtattaa
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