Vibrio cholerae O1 El Tor N16961: VC_0829
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Entry
VC_0829 CDS
T00034
Name
(GenBank) toxin co-regulated pilus biosynthesis protein B
KO
K10931
toxin coregulated pilus biosynthesis protein B
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05110
Vibrio cholerae infection
vch05111
Biofilm formation - Vibrio cholerae
Module
vch_M00852
Vibrio cholerae pathogenicity signature, toxin coregulated pilus
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_0829
09160 Human Diseases
09171 Infectious disease: bacterial
05110 Vibrio cholerae infection
VC_0829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vch02044
]
VC_0829
Secretion system [BR:
vch02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
VC_0829
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CofB_beta-rpt
N_methyl
DUF1453
PNK3P
Motif
Other DBs
NCBI-ProteinID:
AAF93992
UniProt:
P23476
Structure
PDB
PDBj
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All DBs
Position
I:891203..892495
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AA seq
430 aa
AA seq
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MRKYQQGVGLLEAILASAVLGMALVAAGSYYKREAELMIKSSNAFDVIELSSQIQRYASL
SKINNRTNPILKDNKAKEFKDADLKWLKLENCLTAGDVPTTGNNNDLQDQFIACDADYRK
GDLSYFGSQFEFSTYVHPSNPEIQRQIKQVVSYFQYRGMERAFIGDAAGYVISEAKKKGF
SAQDYRIVLIEPDRVGYFESNVISYEEFIENPSARENFLLKATKDRTLALAVSLAQTGEI
AMQRDGSVAFLEDTELCWDTAAGSAKSCLSVRYDTVGNKTELDLKQIDVVSAKGLSFESD
GKTKTPVVSTYETFQDGGRAKTINAIECPTGLNNRFAAVVSSFSTAGQNANFSSESAKDS
QGTTQKDGSKGPHALLSGISLNWTLTNKVWDVTASIGIESGILPTSGIDSGSLLRNPKSL
SFIAFQWCEN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaataccaacaaggtgtcggattattggaggcgattttggcctctgccgtatta
gggatggcattggtcgctgctgggagttattacaagcgggaagctgaactcatgattaaa
tccagtaacgcatttgatgttattgagttgtcatctcaaatccagcgttacgcctcttta
agtaaaattaataatcgtactaacccaatactcaaagataataaggcaaaagaatttaaa
gatgcggatttgaaatggttaaagcttgaaaactgcctcacagcaggtgatgtgccgaca
acgggtaataataatgatctacaagatcagtttattgcttgtgatgctgattataggaaa
ggtgatctaagctattttgggagtcagtttgaattctcaacctatgtacatccttccaac
ccggaaattcaacgacaaataaaacaagtcgtcagctattttcaatatcgaggcatggaa
agagcgtttattggcgatgctgcgggttatgttatcagtgaggccaagaaaaaaggattt
agcgcacaagactatcgaatcgtactaatagaacctgatcgtgtcgggtattttgagtca
aatgttattagctatgaagagtttatagaaaatccatccgctcgtgaaaattttctttta
aaagcgacgaaagatagaactctggcgttggcggtcagtcttgcccaaaccggagaaata
gcaatgcaacgtgatggttccgttgcatttttagaagatactgagttgtgttgggatacg
gcggcaggtagtgcaaagtcttgtctctcggttcggtacgataccgttggaaataaaaca
gaactggatttaaaacagatagatgtggtcagtgcgaaaggcctatcatttgaaagtgat
ggtaaaacaaaaacaccagtggtttctacttatgagacttttcaagatggcggacgggct
aaaaccattaacgctattgaatgcccaacaggtttaaataatcgttttgctgcggtggtg
agttcattttcaactgctggacagaatgcaaactttagttcagagagtgctaaggattct
caaggcacaacccaaaaggatggtagcaaaggaccacatgcgcttctatccggtatatca
ctgaactggacattaacgaataaggtatgggatgtaactgcctcgattggtatcgagtcc
ggtatattgcctacttcaggtatcgattctggatcgttattacgaaaccctaaatcattg
tcttttatagcgtttcaatggtgtgaaaattaa
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