Vibrio cholerae O1 El Tor N16961: VC_0909
Help
Entry
VC_0909 CDS
T00034
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vch03000
]
VC_0909
Transcription factors [BR:
vch03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VC_0909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
HTH_IclR
HTH_3
SpoIIID
HTH_7
HTH_23
AAA_18
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AAF94071
UniProt:
Q9KTJ3
LinkDB
All DBs
Position
I:968601..969551
Genome browser
AA seq
316 aa
AA seq
DB search
MNRKLTILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGG
SQKVVGIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVD
GVIVFGFTDIDHDALLSWQHRCVLLAMHSDEISSINYDNAGVIERALQHLAQKQLRDIAF
IGVDPRDKTTGEQRLNAYLNWCVEHEIVANYQTGQLHHESAYLLVDKVLTEQTQAIVCAS
DTLALGVIKRLQELQRDDVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAADLLIEQLC
GSDHGCVHLTQMPVSR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaaaactgactattttagacattgctagactctcaggcgtcggtaaatctacc
gtttcgcgcgtgttaaccaatgatcctaaagtgaagcctgaaacccgcgctaaagtagag
caggtgattgcagagtcggggtatgtgccctctaaatcggcacaaaccatgcgtggtggt
agtcagaaagtcgtgggcatcattatttcacgtctggattccccttctgaaaacaaagca
gtcagtactatgctgcaagctttctatgctcacggctacgatgtggtgatcatggaaagc
caatttagccgcgaaaaaaccaatgctcacttaaaagtgctcgccaagcggcaagtggat
ggcgtcattgtgtttggctttaccgatatcgatcatgatgccttgctcagttggcagcac
cgctgtgtactcttggccatgcacagtgatgagatttcctctatcaattatgacaatgct
ggggtgattgagcgtgcgctgcagcatttggcacaaaaacagttacgcgatattgccttc
attggggtcgacccacgtgacaaaaccacgggtgagcagcggctcaacgcctatctcaat
tggtgtgttgagcatgagattgtggcgaattaccaaaccggacaactgcatcatgaaagt
gcttatctgctggtagataaagtgctgactgagcaaacccaagcgattgtgtgcgcgagt
gatactttggcgctcggtgtgattaagcgtttgcaagagctgcagcgagatgacgtagtg
gtgacgggggtgggtggtaatgagttgctctctttcctgtttccgaacatattcagtgtc
gatcctggttatcgtgaggccggaaaactggcggcagatctgctgattgagcagctatgc
ggctctgaccatggctgtgtgcatttgacccaaatgccagtgtcacgctaa
DBGET
integrated database retrieval system
