Vibrio cholerae O1 El Tor N16961: VC_0962
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Entry
VC_0962 CDS
T00034
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vch03016
]
VC_0962
Enzymes [BR:
vch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VC_0962
Transfer RNA biogenesis [BR:
vch03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VC_0962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
Motif
Other DBs
NCBI-ProteinID:
AAF94124
UniProt:
Q9KTE0
LinkDB
All DBs
Position
I:complement(1026188..1027612)
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AA seq
474 aa
AA seq
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MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQT
SDAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKE
RLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIG
QFVDVKIVDVFPNSLRGELLRTEQEMNLRIATSPSEMKAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacttggggctgccagatgaacgagtacgattcatcg
aaaatggctgacctgcttaatgctgcaaacggctatgagctgacagaaatacccgaggaa
gctgacgttttactcctaaacacctgttcgattcgtgaaaaggcgcaggaaaaagtcttc
caccaactcggtcgttggaaaaccctgaaagacaagaagccaggtgtcgtgatcggtgtc
ggtggctgtgttgctactcaagaaggtgactcgattcgcgatcgtgcgccttatgtggat
gtcatcttcggcccacagacgctgcatcgtctgccagaaatgattaaacaatcgcaaacc
agcgacgcgcccgtgatggatatctctttccctgagattgaaaaattcgaccgcctgcct
gagccacgtgcggaaggcccaacggcgttcgtttctatcatggaaggctgctcaaaatac
tgtacttactgcgtagtgccttacacacgcggtgaagaagtcagccgtcctatggacgat
gtcctgttcgagatcgctcagcttgccgagcaaggggtgcgtgaagttaacctgctgggt
caaaacgtcaacgcttaccgtggtgccactcacgatggcggcatttgctctttcgctgaa
ttactgcgtttggtcgccaccattgacggcatcgatcgtatccgctttaccactagccac
ccactcgaatttaccgatgacattattgcagtgtacgaagacacgcctgagctggtgagc
ttcctgcacttgccagtacaaagtgggagcgatcgcattctgactatgatgaagcgtcca
catacggcgattgagtacaaatccatcatccgtaagctacgtaaagcacgcccagatatt
caaatcagctctgattttatcgttggcttcccaggggaaaccgacaaagatttccaagac
accatgaagctgatccgcgatgtcgatttcgacatgagctttagctttattttctcacct
cgtccaggcacacccgccgctgactatccttgcgatctgtcggaagaagtgaagaaagaa
cgtctgtatgaactgcaacagcagatcaacagccaagctatgcgttattcacgcctgatg
ctgggtactgaacagcgtattttggttgaaggcccctcgaaaaaagatctgatggagctg
cgtggccgtactgaaaataaccgtgtagtgaacttcgaaggctcaccggatctgatcggt
caatttgttgatgtgaagatcgttgacgttttcccgaactcactgcgcggtgaactgctg
cgtaccgaacaagagatgaatctgcgtatcgcgacctctccctctgaaatgaaagcgaag
actcgccgcgaggatgagcttggggttgctacatttactccttaa
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