Vibrio cholerae O1 El Tor N16961: VC_0999
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Entry
VC_0999 CDS
T00034
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vch03016
]
VC_0999
Enzymes [BR:
vch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VC_0999
Transfer RNA biogenesis [BR:
vch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VC_0999
Prokaryotic type
VC_0999
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
RTC_insert
Motif
Other DBs
NCBI-ProteinID:
AAF94160
UniProt:
Q9KTA4
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All DBs
Position
I:1069965..1070759
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AA seq
264 aa
AA seq
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MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV
VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP
GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY
VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS
VDYPAHFGLPEMPIGPLFLPDNLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcgttaggtattgagtatgacgggactcactactacggttggcagcgccag
agagaagtcaaaagtgtccaagaagcgttagaaaaggcgctgagtaagattgccaatcat
ccagtggaagtgcagtgtgctgggcgaactgatgcgggggtacatggtactgggcaagtg
gtgcactttgataccaccgccgaacggcagatggtcgcttggaccatgggcgccaacgcg
aatttgccgaaggatattgcagtacgctgggcgatggcggttcctgatgaatttcatgca
cgattcagtgccactgcacgccgttatcgttatgtcatttacaaccatgtttatcgcccg
gggattttgaattctggtgtcagccattaccacggcgagctggatgttgaaaaaatgcag
caagcagggcagtacttgctgggggaaaatgatttcacctcatttcgtgcggtgcattgt
cagtcccgtagtccttggcgtaacgtcatgcatctgaatgtgacgcgtcacggtcgttat
gtggtgattgatattaaagccaatgcgttcgtgcatcatatggtacgcaatatcacgggt
agcttgatagccgtcgggcgtggtgagcagaagccagagtggattcaatggttattggca
caaaaagatcgcaccttagcggcggcgacggccaaagcggaggggctctacttggtttct
gttgattaccctgcgcattttgggttgcccgaaatgccaattgggccacttttcttgcct
gataatttgaactaa
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